Protein–RNA interactions for Protein: A0A1B0GVQ3

LINC00854, Long intergenic non-protein coding RNA 854, humanhuman

Predictions only

Length 168 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00854A0A1B0GVQ3 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00854A0A1B0GVQ3 GATA2-AS1-202ENST00000468377 1578 ntTSL 2 BASIC20.78■□□□□ 0.92
LINC00854A0A1B0GVQ3 FAM58A-202ENST00000440428 1164 ntAPPRIS P2 TSL 2 BASIC20.78■□□□□ 0.92
LINC00854A0A1B0GVQ3 MYCN-201ENST00000281043 2602 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
LINC00854A0A1B0GVQ3 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00854A0A1B0GVQ3 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00854A0A1B0GVQ3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LINC00854A0A1B0GVQ3 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LINC00854A0A1B0GVQ3 GAS1-201ENST00000298743 2827 ntAPPRIS P1 BASIC20.77■□□□□ 0.92
LINC00854A0A1B0GVQ3 MROH6-211ENST00000534459 1789 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
LINC00854A0A1B0GVQ3 EFCC1-201ENST00000436022 2691 ntAPPRIS P1 TSL 5 BASIC20.77■□□□□ 0.92
LINC00854A0A1B0GVQ3 AMH-201ENST00000221496 1821 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00854A0A1B0GVQ3 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00854A0A1B0GVQ3 DAZAP1-201ENST00000233078 2160 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00854A0A1B0GVQ3 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.77■□□□□ 0.92
LINC00854A0A1B0GVQ3 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.77■□□□□ 0.92
LINC00854A0A1B0GVQ3 ECHDC3-201ENST00000379215 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00854A0A1B0GVQ3 TMEM102-201ENST00000323206 1973 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LINC00854A0A1B0GVQ3 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.76■□□□□ 0.91
LINC00854A0A1B0GVQ3 C1QTNF1-206ENST00000579760 1672 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LINC00854A0A1B0GVQ3 ALDH16A1-203ENST00000540132 2174 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC00854A0A1B0GVQ3 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.76■□□□□ 0.91
LINC00854A0A1B0GVQ3 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LINC00854A0A1B0GVQ3 PHF23-212ENST00000576955 1944 ntTSL 2 BASIC20.75■□□□□ 0.91
LINC00854A0A1B0GVQ3 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
LINC00854A0A1B0GVQ3 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
LINC00854A0A1B0GVQ3 HRH3-202ENST00000340177 2659 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC00854A0A1B0GVQ3 MAGED2-206ENST00000375068 2189 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC00854A0A1B0GVQ3 PTGES2-202ENST00000338961 2331 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
LINC00854A0A1B0GVQ3 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC20.74■□□□□ 0.91
LINC00854A0A1B0GVQ3 CSNK1G2-201ENST00000255641 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00854A0A1B0GVQ3 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00854A0A1B0GVQ3 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00854A0A1B0GVQ3 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00854A0A1B0GVQ3 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00854A0A1B0GVQ3 FSD1-204ENST00000597590 1634 ntTSL 5 BASIC20.74■□□□□ 0.91
LINC00854A0A1B0GVQ3 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
LINC00854A0A1B0GVQ3 EED-207ENST00000528180 1745 ntTSL 5 BASIC20.73■□□□□ 0.91
LINC00854A0A1B0GVQ3 ATP6V0A2-209ENST00000613625 1620 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00854A0A1B0GVQ3 WRNIP1-204ENST00000380773 2670 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00854A0A1B0GVQ3 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00854A0A1B0GVQ3 ARTN-211ENST00000498139 1303 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00854A0A1B0GVQ3 SLC25A29-202ENST00000392908 2242 ntTSL 2 BASIC20.73■□□□□ 0.91
LINC00854A0A1B0GVQ3 KEAP1-202ENST00000393623 2648 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
LINC00854A0A1B0GVQ3 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00854A0A1B0GVQ3 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00854A0A1B0GVQ3 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00854A0A1B0GVQ3 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
LINC00854A0A1B0GVQ3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00854A0A1B0GVQ3 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
LINC00854A0A1B0GVQ3 FAM86JP-203ENST00000485843 2012 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00854A0A1B0GVQ3 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LINC00854A0A1B0GVQ3 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.71■□□□□ 0.91
LINC00854A0A1B0GVQ3 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00854A0A1B0GVQ3 DACT3-202ENST00000391916 2834 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
LINC00854A0A1B0GVQ3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
LINC00854A0A1B0GVQ3 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00854A0A1B0GVQ3 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC20.7■□□□□ 0.9
LINC00854A0A1B0GVQ3 OSBPL5-208ENST00000478260 2653 ntTSL 2 BASIC20.7■□□□□ 0.9
LINC00854A0A1B0GVQ3 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00854A0A1B0GVQ3 MALT1-201ENST00000345724 2866 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00854A0A1B0GVQ3 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00854A0A1B0GVQ3 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00854A0A1B0GVQ3 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00854A0A1B0GVQ3 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
LINC00854A0A1B0GVQ3 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
LINC00854A0A1B0GVQ3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00854A0A1B0GVQ3 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00854A0A1B0GVQ3 ING1-201ENST00000333219 5119 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00854A0A1B0GVQ3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC20.69■□□□□ 0.9
LINC00854A0A1B0GVQ3 SNHG7-201ENST00000414282 2357 ntTSL 2 BASIC20.69■□□□□ 0.9
LINC00854A0A1B0GVQ3 HAS1-201ENST00000222115 2087 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00854A0A1B0GVQ3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00854A0A1B0GVQ3 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00854A0A1B0GVQ3 LY6K-201ENST00000292430 2671 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
LINC00854A0A1B0GVQ3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.68■□□□□ 0.9
LINC00854A0A1B0GVQ3 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.68■□□□□ 0.9
LINC00854A0A1B0GVQ3 EPM2A-208ENST00000618445 1694 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00854A0A1B0GVQ3 MAP6D1-202ENST00000431348 890 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LINC00854A0A1B0GVQ3 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00854A0A1B0GVQ3 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00854A0A1B0GVQ3 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00854A0A1B0GVQ3 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00854A0A1B0GVQ3 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.68■□□□□ 0.9
LINC00854A0A1B0GVQ3 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00854A0A1B0GVQ3 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
LINC00854A0A1B0GVQ3 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
LINC00854A0A1B0GVQ3 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00854A0A1B0GVQ3 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.67■□□□□ 0.9
LINC00854A0A1B0GVQ3 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00854A0A1B0GVQ3 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC20.67■□□□□ 0.9
LINC00854A0A1B0GVQ3 PRKAR1B-211ENST00000537384 2533 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
LINC00854A0A1B0GVQ3 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00854A0A1B0GVQ3 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00854A0A1B0GVQ3 STOML1-201ENST00000316900 2169 ntTSL 2 BASIC20.67■□□□□ 0.9
LINC00854A0A1B0GVQ3 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00854A0A1B0GVQ3 NECAB2-201ENST00000305202 1608 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00854A0A1B0GVQ3 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00854A0A1B0GVQ3 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.67■□□□□ 0.9
LINC00854A0A1B0GVQ3 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms