Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC23.86■■□□□ 1.41
CCDC163A0A0D9SF12 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
CCDC163A0A0D9SF12 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC23.86■■□□□ 1.41
CCDC163A0A0D9SF12 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC163A0A0D9SF12 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC163A0A0D9SF12 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
CCDC163A0A0D9SF12 HIST1H2AL-201ENST00000613174 393 ntAPPRIS P1 BASIC23.85■■□□□ 1.41
CCDC163A0A0D9SF12 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC163A0A0D9SF12 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC163A0A0D9SF12 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
CCDC163A0A0D9SF12 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC23.84■■□□□ 1.41
CCDC163A0A0D9SF12 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC163A0A0D9SF12 MOB4-204ENST00000409360 1447 ntTSL 5 BASIC23.84■■□□□ 1.41
CCDC163A0A0D9SF12 LINC01003-201ENST00000564834 1764 ntBASIC23.83■■□□□ 1.41
CCDC163A0A0D9SF12 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC163A0A0D9SF12 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC23.83■■□□□ 1.41
CCDC163A0A0D9SF12 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC23.83■■□□□ 1.41
CCDC163A0A0D9SF12 AK3-203ENST00000447596 705 ntTSL 2 BASIC23.83■■□□□ 1.41
CCDC163A0A0D9SF12 SSSCA1-AS1-201ENST00000567594 614 ntBASIC23.83■■□□□ 1.41
CCDC163A0A0D9SF12 PNCK-204ENST00000370150 1612 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
CCDC163A0A0D9SF12 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.4
CCDC163A0A0D9SF12 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
CCDC163A0A0D9SF12 QDPR-206ENST00000508623 601 ntTSL 3 BASIC23.82■■□□□ 1.4
CCDC163A0A0D9SF12 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC23.82■■□□□ 1.4
CCDC163A0A0D9SF12 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC23.82■■□□□ 1.4
CCDC163A0A0D9SF12 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC23.81■■□□□ 1.4
CCDC163A0A0D9SF12 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
CCDC163A0A0D9SF12 EBPL-204ENST00000378272 766 ntTSL 3 BASIC23.8■■□□□ 1.4
CCDC163A0A0D9SF12 ABCB10P1-201ENST00000614297 2181 ntBASIC23.8■■□□□ 1.4
CCDC163A0A0D9SF12 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC23.79■■□□□ 1.4
CCDC163A0A0D9SF12 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC163A0A0D9SF12 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC23.79■■□□□ 1.4
CCDC163A0A0D9SF12 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
CCDC163A0A0D9SF12 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC23.79■■□□□ 1.4
CCDC163A0A0D9SF12 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CCDC163A0A0D9SF12 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC163A0A0D9SF12 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC23.78■■□□□ 1.4
CCDC163A0A0D9SF12 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC163A0A0D9SF12 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC23.78■■□□□ 1.4
CCDC163A0A0D9SF12 CLTA-210ENST00000540080 989 ntTSL 2 BASIC23.78■■□□□ 1.4
CCDC163A0A0D9SF12 CAPNS1-205ENST00000588780 1035 ntAPPRIS ALT2 TSL 5 BASIC23.78■■□□□ 1.4
CCDC163A0A0D9SF12 AC106739.1-201ENST00000617035 715 ntBASIC23.78■■□□□ 1.4
CCDC163A0A0D9SF12 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
CCDC163A0A0D9SF12 VSIG8-201ENST00000368100 1818 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC163A0A0D9SF12 ANKRD16-202ENST00000380092 1646 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
CCDC163A0A0D9SF12 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
CCDC163A0A0D9SF12 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC23.77■■□□□ 1.4
CCDC163A0A0D9SF12 SSR2-210ENST00000480567 895 ntAPPRIS P1 TSL 2 BASIC23.77■■□□□ 1.4
CCDC163A0A0D9SF12 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC23.77■■□□□ 1.4
CCDC163A0A0D9SF12 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC163A0A0D9SF12 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
CCDC163A0A0D9SF12 AC009097.2-201ENST00000562763 465 ntTSL 2 BASIC23.76■■□□□ 1.39
CCDC163A0A0D9SF12 LINC01632-201ENST00000615763 496 ntTSL 3 BASIC23.76■■□□□ 1.39
CCDC163A0A0D9SF12 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC163A0A0D9SF12 CD72-202ENST00000378430 585 ntTSL 3 BASIC23.75■■□□□ 1.39
CCDC163A0A0D9SF12 TFPT-201ENST00000391757 774 ntTSL 5 BASIC23.75■■□□□ 1.39
CCDC163A0A0D9SF12 TFPT-202ENST00000391758 804 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC163A0A0D9SF12 DRD5P2-201ENST00000421395 2012 ntBASIC23.75■■□□□ 1.39
CCDC163A0A0D9SF12 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC163A0A0D9SF12 FGF22-201ENST00000215530 1311 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC163A0A0D9SF12 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC163A0A0D9SF12 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
CCDC163A0A0D9SF12 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC23.74■■□□□ 1.39
CCDC163A0A0D9SF12 ST7-208ENST00000393451 2110 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC163A0A0D9SF12 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
CCDC163A0A0D9SF12 DNPH1-201ENST00000230431 657 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC163A0A0D9SF12 NKX2-8-201ENST00000258829 1261 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC163A0A0D9SF12 GUK1-205ENST00000366722 850 ntTSL 3 BASIC23.74■■□□□ 1.39
CCDC163A0A0D9SF12 SLC25A10-202ENST00000350690 1885 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
CCDC163A0A0D9SF12 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC163A0A0D9SF12 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC163A0A0D9SF12 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC163A0A0D9SF12 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC23.73■■□□□ 1.39
CCDC163A0A0D9SF12 GPX4-213ENST00000622390 1002 ntTSL 5 BASIC23.73■■□□□ 1.39
CCDC163A0A0D9SF12 AF131216.4-201ENST00000638924 1588 ntBASIC23.73■■□□□ 1.39
CCDC163A0A0D9SF12 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC23.73■■□□□ 1.39
CCDC163A0A0D9SF12 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CCDC163A0A0D9SF12 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC163A0A0D9SF12 SNAI3-AS1-204ENST00000567997 2048 ntBASIC23.72■■□□□ 1.39
CCDC163A0A0D9SF12 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC163A0A0D9SF12 TXNRD2-204ENST00000400521 2115 ntAPPRIS P2 TSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC163A0A0D9SF12 PARD6B-202ENST00000396039 522 ntTSL 1 (best) BASIC23.72■■□□□ 1.39
CCDC163A0A0D9SF12 AC105935.1-201ENST00000424174 422 ntTSL 3 BASIC23.72■■□□□ 1.39
CCDC163A0A0D9SF12 RASSF1-AS1-201ENST00000629828 790 ntBASIC23.72■■□□□ 1.39
CCDC163A0A0D9SF12 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC23.72■■□□□ 1.39
CCDC163A0A0D9SF12 TPRG1L-202ENST00000378344 2414 ntAPPRIS P1 TSL 2 BASIC23.72■■□□□ 1.39
CCDC163A0A0D9SF12 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC23.71■■□□□ 1.39
CCDC163A0A0D9SF12 RARRES2P6-201ENST00000567333 442 ntBASIC23.71■■□□□ 1.39
CCDC163A0A0D9SF12 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.39
CCDC163A0A0D9SF12 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CCDC163A0A0D9SF12 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC163A0A0D9SF12 MRPL41-201ENST00000371443 1262 ntAPPRIS P1 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC163A0A0D9SF12 SUSD3-202ENST00000375472 1195 ntAPPRIS P3 TSL 1 (best) BASIC23.7■■□□□ 1.38
CCDC163A0A0D9SF12 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC23.7■■□□□ 1.38
CCDC163A0A0D9SF12 PBX2P1-201ENST00000493219 1291 ntBASIC23.7■■□□□ 1.38
CCDC163A0A0D9SF12 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC23.7■■□□□ 1.38
CCDC163A0A0D9SF12 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC23.7■■□□□ 1.38
CCDC163A0A0D9SF12 DHRS11-215ENST00000618403 1598 ntAPPRIS P1 TSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC163A0A0D9SF12 PPP1R3F-205ENST00000495799 1537 ntTSL 1 (best) BASIC23.69■■□□□ 1.38
CCDC163A0A0D9SF12 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC23.69■■□□□ 1.38
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms