Protein–RNA interactions for Protein: A0A0B4J2F2

LOC102724428, SNF1-like kinase, isoform CRA_a, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LOC102724428A0A0B4J2F2 C12orf75-207ENST00000552457 689 ntTSL 5 BASIC30.8■■■□□ 2.52
LOC102724428A0A0B4J2F2 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC30.8■■■□□ 2.52
LOC102724428A0A0B4J2F2 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC30.79■■■□□ 2.52
LOC102724428A0A0B4J2F2 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC30.79■■■□□ 2.52
LOC102724428A0A0B4J2F2 PLEK2-201ENST00000216446 1549 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
LOC102724428A0A0B4J2F2 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
LOC102724428A0A0B4J2F2 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
LOC102724428A0A0B4J2F2 PFN2-210ENST00000481767 1620 ntTSL 2 BASIC30.78■■■□□ 2.52
LOC102724428A0A0B4J2F2 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC30.78■■■□□ 2.52
LOC102724428A0A0B4J2F2 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC30.78■■■□□ 2.52
LOC102724428A0A0B4J2F2 AC005837.3-201ENST00000612163 286 ntBASIC30.78■■■□□ 2.52
LOC102724428A0A0B4J2F2 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC30.78■■■□□ 2.52
LOC102724428A0A0B4J2F2 ST7-202ENST00000323984 2142 ntTSL 5 BASIC30.77■■■□□ 2.52
LOC102724428A0A0B4J2F2 ST7-207ENST00000393449 2127 ntTSL 5 BASIC30.77■■■□□ 2.52
LOC102724428A0A0B4J2F2 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
LOC102724428A0A0B4J2F2 AC096631.2-201ENST00000436136 790 ntBASIC30.77■■■□□ 2.52
LOC102724428A0A0B4J2F2 AL356740.2-201ENST00000601559 647 ntBASIC30.77■■■□□ 2.52
LOC102724428A0A0B4J2F2 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
LOC102724428A0A0B4J2F2 SH2B1-205ENST00000538342 1532 ntTSL 2 BASIC30.77■■■□□ 2.52
LOC102724428A0A0B4J2F2 ADRM1-205ENST00000620230 1361 ntTSL 5 BASIC30.77■■■□□ 2.52
LOC102724428A0A0B4J2F2 AC139426.1-201ENST00000568218 2529 ntBASIC30.77■■■□□ 2.52
LOC102724428A0A0B4J2F2 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
LOC102724428A0A0B4J2F2 STOML1-202ENST00000316911 1891 ntTSL 1 (best) BASIC30.76■■■□□ 2.52
LOC102724428A0A0B4J2F2 TOMM40-203ENST00000426677 1725 ntAPPRIS P2 TSL 1 (best) BASIC30.76■■■□□ 2.52
LOC102724428A0A0B4J2F2 POLR2F-211ENST00000488684 564 ntTSL 2 BASIC30.76■■■□□ 2.51
LOC102724428A0A0B4J2F2 MCRIP1-210ENST00000576431 577 ntTSL 5 BASIC30.76■■■□□ 2.51
LOC102724428A0A0B4J2F2 AC011551.1-201ENST00000614101 683 ntBASIC30.76■■■□□ 2.51
LOC102724428A0A0B4J2F2 GAK-223ENST00000628912 497 ntTSL 5 BASIC30.76■■■□□ 2.51
LOC102724428A0A0B4J2F2 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC30.76■■■□□ 2.51
LOC102724428A0A0B4J2F2 RHBDD2-202ENST00000318622 1878 ntTSL 2 BASIC30.75■■■□□ 2.51
LOC102724428A0A0B4J2F2 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC30.75■■■□□ 2.51
LOC102724428A0A0B4J2F2 JMJD1C-AS1-201ENST00000609436 1335 ntBASIC30.74■■■□□ 2.51
LOC102724428A0A0B4J2F2 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC30.74■■■□□ 2.51
LOC102724428A0A0B4J2F2 TK2-202ENST00000417693 1046 ntTSL 2 BASIC30.74■■■□□ 2.51
LOC102724428A0A0B4J2F2 EXOG-217ENST00000630638 197 ntTSL 5 BASIC30.74■■■□□ 2.51
LOC102724428A0A0B4J2F2 FKBP8-213ENST00000608443 1849 ntAPPRIS P3 TSL 1 (best) BASIC30.74■■■□□ 2.51
LOC102724428A0A0B4J2F2 MADCAM1-202ENST00000346144 1309 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
LOC102724428A0A0B4J2F2 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC30.73■■■□□ 2.51
LOC102724428A0A0B4J2F2 SYT7-202ENST00000535826 1621 ntTSL 5 BASIC30.73■■■□□ 2.51
LOC102724428A0A0B4J2F2 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC30.73■■■□□ 2.51
LOC102724428A0A0B4J2F2 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC30.73■■■□□ 2.51
LOC102724428A0A0B4J2F2 SLC25A39-203ENST00000537904 1274 ntTSL 2 BASIC30.73■■■□□ 2.51
LOC102724428A0A0B4J2F2 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC30.73■■■□□ 2.51
LOC102724428A0A0B4J2F2 LY6H-205ENST00000615409 980 ntAPPRIS P3 TSL 1 (best) BASIC30.73■■■□□ 2.51
LOC102724428A0A0B4J2F2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC30.73■■■□□ 2.51
LOC102724428A0A0B4J2F2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC30.73■■■□□ 2.51
LOC102724428A0A0B4J2F2 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC30.73■■■□□ 2.51
LOC102724428A0A0B4J2F2 FUS-202ENST00000380244 1818 ntAPPRIS ALT2 TSL 1 (best) BASIC30.73■■■□□ 2.51
LOC102724428A0A0B4J2F2 FBXL6-201ENST00000331890 1785 ntAPPRIS P3 TSL 1 (best) BASIC30.72■■■□□ 2.51
LOC102724428A0A0B4J2F2 QDPR-206ENST00000508623 601 ntTSL 3 BASIC30.72■■■□□ 2.51
LOC102724428A0A0B4J2F2 RAB20-201ENST00000267328 1518 ntAPPRIS P1 TSL 1 (best) BASIC30.72■■■□□ 2.51
LOC102724428A0A0B4J2F2 AL512631.2-201ENST00000604634 923 ntBASIC30.71■■■□□ 2.51
LOC102724428A0A0B4J2F2 SRRM2-231ENST00000630499 1207 ntTSL 1 (best) BASIC30.71■■■□□ 2.51
LOC102724428A0A0B4J2F2 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC30.7■■■□□ 2.51
LOC102724428A0A0B4J2F2 NRG2-203ENST00000340391 1944 ntTSL 5 BASIC30.7■■■□□ 2.51
LOC102724428A0A0B4J2F2 IL15RA-214ENST00000525219 1850 ntAPPRIS ALT2 TSL 1 (best) BASIC30.7■■■□□ 2.5
LOC102724428A0A0B4J2F2 AP004609.3-201ENST00000610705 1884 ntBASIC30.7■■■□□ 2.5
LOC102724428A0A0B4J2F2 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LOC102724428A0A0B4J2F2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC30.69■■■□□ 2.5
LOC102724428A0A0B4J2F2 RPP38-201ENST00000378197 1457 ntAPPRIS P1 TSL 1 (best) BASIC30.69■■■□□ 2.5
LOC102724428A0A0B4J2F2 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC30.68■■■□□ 2.5
LOC102724428A0A0B4J2F2 NPW-201ENST00000329610 498 ntAPPRIS P2 TSL 1 (best) BASIC30.68■■■□□ 2.5
LOC102724428A0A0B4J2F2 POLE2-201ENST00000216367 1776 ntAPPRIS P1 TSL 1 (best) BASIC30.68■■■□□ 2.5
LOC102724428A0A0B4J2F2 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC30.68■■■□□ 2.5
LOC102724428A0A0B4J2F2 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC30.67■■■□□ 2.5
LOC102724428A0A0B4J2F2 AC133561.4-201ENST00000566112 224 ntBASIC30.67■■■□□ 2.5
LOC102724428A0A0B4J2F2 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC30.67■■■□□ 2.5
LOC102724428A0A0B4J2F2 CTU1-201ENST00000421832 2087 ntAPPRIS P1 TSL 2 BASIC30.66■■■□□ 2.5
LOC102724428A0A0B4J2F2 KDELR3-202ENST00000409006 931 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
LOC102724428A0A0B4J2F2 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
LOC102724428A0A0B4J2F2 CLTA-204ENST00000433436 1235 ntAPPRIS ALT1 TSL 1 (best) BASIC30.66■■■□□ 2.5
LOC102724428A0A0B4J2F2 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC30.66■■■□□ 2.5
LOC102724428A0A0B4J2F2 CLTA-209ENST00000538225 1181 ntTSL 2 BASIC30.66■■■□□ 2.5
LOC102724428A0A0B4J2F2 CLTA-210ENST00000540080 989 ntTSL 2 BASIC30.66■■■□□ 2.5
LOC102724428A0A0B4J2F2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC30.66■■■□□ 2.5
LOC102724428A0A0B4J2F2 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC30.65■■■□□ 2.5
LOC102724428A0A0B4J2F2 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC30.65■■■□□ 2.5
LOC102724428A0A0B4J2F2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.64■■■□□ 2.5
LOC102724428A0A0B4J2F2 AK3-203ENST00000447596 705 ntTSL 2 BASIC30.64■■■□□ 2.5
LOC102724428A0A0B4J2F2 ERRFI1-204ENST00000474874 479 ntTSL 3 BASIC30.64■■■□□ 2.5
LOC102724428A0A0B4J2F2 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC30.64■■■□□ 2.5
LOC102724428A0A0B4J2F2 RASSF1-AS1-201ENST00000629828 790 ntBASIC30.64■■■□□ 2.5
LOC102724428A0A0B4J2F2 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC30.63■■■□□ 2.49
LOC102724428A0A0B4J2F2 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC30.63■■■□□ 2.49
LOC102724428A0A0B4J2F2 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC30.63■■■□□ 2.49
LOC102724428A0A0B4J2F2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC30.62■■■□□ 2.49
LOC102724428A0A0B4J2F2 AF131216.4-201ENST00000638924 1588 ntBASIC30.62■■■□□ 2.49
LOC102724428A0A0B4J2F2 SNAI3-AS1-204ENST00000567997 2048 ntBASIC30.61■■■□□ 2.49
LOC102724428A0A0B4J2F2 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.61■■■□□ 2.49
LOC102724428A0A0B4J2F2 DCTPP1-201ENST00000319285 1222 ntAPPRIS P1 TSL 1 (best) BASIC30.61■■■□□ 2.49
LOC102724428A0A0B4J2F2 TRIM7-202ENST00000334421 1228 ntTSL 1 (best) BASIC30.61■■■□□ 2.49
LOC102724428A0A0B4J2F2 ZNF74-204ENST00000405993 1839 ntAPPRIS ALT2 TSL 5 BASIC30.61■■■□□ 2.49
LOC102724428A0A0B4J2F2 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC30.61■■■□□ 2.49
LOC102724428A0A0B4J2F2 CBR3-201ENST00000290354 1169 ntAPPRIS P1 TSL 1 (best) BASIC30.6■■■□□ 2.49
LOC102724428A0A0B4J2F2 YTHDF1-201ENST00000370334 747 ntTSL 3 BASIC30.6■■■□□ 2.49
LOC102724428A0A0B4J2F2 CD72-202ENST00000378430 585 ntTSL 3 BASIC30.6■■■□□ 2.49
LOC102724428A0A0B4J2F2 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC30.6■■■□□ 2.49
LOC102724428A0A0B4J2F2 MCRIP1-202ENST00000457257 942 ntTSL 3 BASIC30.6■■■□□ 2.49
LOC102724428A0A0B4J2F2 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC30.6■■■□□ 2.49
LOC102724428A0A0B4J2F2 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC30.59■■■□□ 2.49
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms