Protein–RNA interactions for Protein: A0A0B4J262

TRAV8-6, T-cell receptor alpha variable 8-6 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV8-6A0A0B4J262 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
TRAV8-6A0A0B4J262 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
TRAV8-6A0A0B4J262 CR559946.2-201ENST00000623684 991 ntBASIC17.27■□□□□ 0.36
TRAV8-6A0A0B4J262 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC17.27■□□□□ 0.36
TRAV8-6A0A0B4J262 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV8-6A0A0B4J262 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC17.27■□□□□ 0.35
TRAV8-6A0A0B4J262 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV8-6A0A0B4J262 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC17.27■□□□□ 0.35
TRAV8-6A0A0B4J262 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC17.27■□□□□ 0.35
TRAV8-6A0A0B4J262 ITM2C-203ENST00000335005 1889 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
TRAV8-6A0A0B4J262 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-6A0A0B4J262 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-6A0A0B4J262 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-6A0A0B4J262 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAV8-6A0A0B4J262 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC17.26■□□□□ 0.35
TRAV8-6A0A0B4J262 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-6A0A0B4J262 LYPD6B-203ENST00000409642 1577 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-6A0A0B4J262 TIGD3-201ENST00000309880 2012 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
TRAV8-6A0A0B4J262 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-6A0A0B4J262 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
TRAV8-6A0A0B4J262 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-6A0A0B4J262 C19orf47-202ENST00000392035 2126 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
TRAV8-6A0A0B4J262 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-6A0A0B4J262 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-6A0A0B4J262 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC17.25■□□□□ 0.35
TRAV8-6A0A0B4J262 E2F5-203ENST00000418930 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-6A0A0B4J262 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-6A0A0B4J262 AC016575.1-201ENST00000607026 382 ntBASIC17.25■□□□□ 0.35
TRAV8-6A0A0B4J262 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
TRAV8-6A0A0B4J262 PYCR1-202ENST00000337943 1890 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-6A0A0B4J262 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-6A0A0B4J262 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC17.24■□□□□ 0.35
TRAV8-6A0A0B4J262 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
TRAV8-6A0A0B4J262 F8A1-201ENST00000610495 1713 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
TRAV8-6A0A0B4J262 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-6A0A0B4J262 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-6A0A0B4J262 CACTIN-AS1-201ENST00000592274 1913 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV8-6A0A0B4J262 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV8-6A0A0B4J262 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-6A0A0B4J262 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-6A0A0B4J262 AKT2-210ENST00000424901 5170 ntTSL 5 BASIC17.23■□□□□ 0.35
TRAV8-6A0A0B4J262 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.23■□□□□ 0.35
TRAV8-6A0A0B4J262 FUT11-202ENST00000394790 2175 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
TRAV8-6A0A0B4J262 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-6A0A0B4J262 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-6A0A0B4J262 TMCO6-201ENST00000252100 1834 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-6A0A0B4J262 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-6A0A0B4J262 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC17.22■□□□□ 0.35
TRAV8-6A0A0B4J262 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-6A0A0B4J262 ST3GAL5-222ENST00000638572 4431 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-6A0A0B4J262 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-6A0A0B4J262 GYG2-205ENST00000398806 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-6A0A0B4J262 HTRA2-201ENST00000258080 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
TRAV8-6A0A0B4J262 NTN3-201ENST00000293973 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-6A0A0B4J262 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-6A0A0B4J262 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
TRAV8-6A0A0B4J262 BTBD6-203ENST00000392554 2176 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.34
TRAV8-6A0A0B4J262 LTBP3-201ENST00000301873 4443 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
TRAV8-6A0A0B4J262 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-6A0A0B4J262 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-6A0A0B4J262 C18orf65-201ENST00000622985 2076 ntTSL 2 BASIC17.2■□□□□ 0.34
TRAV8-6A0A0B4J262 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
TRAV8-6A0A0B4J262 PREB-202ENST00000406567 1910 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV8-6A0A0B4J262 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-6A0A0B4J262 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.19■□□□□ 0.34
TRAV8-6A0A0B4J262 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC17.19■□□□□ 0.34
TRAV8-6A0A0B4J262 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-6A0A0B4J262 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRAV8-6A0A0B4J262 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRAV8-6A0A0B4J262 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
TRAV8-6A0A0B4J262 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-6A0A0B4J262 SLC30A3-201ENST00000233535 2260 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-6A0A0B4J262 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
TRAV8-6A0A0B4J262 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-6A0A0B4J262 IRX2-201ENST00000302057 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-6A0A0B4J262 AC148477.6-201ENST00000623746 465 ntBASIC17.18■□□□□ 0.34
TRAV8-6A0A0B4J262 LOXL1-201ENST00000261921 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-6A0A0B4J262 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-6A0A0B4J262 TCF7L1-201ENST00000282111 2968 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-6A0A0B4J262 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRAV8-6A0A0B4J262 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
TRAV8-6A0A0B4J262 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRAV8-6A0A0B4J262 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRAV8-6A0A0B4J262 G6PC3-201ENST00000269097 1533 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-6A0A0B4J262 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-6A0A0B4J262 AL121987.2-201ENST00000418602 1578 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV8-6A0A0B4J262 HLA-V-202ENST00000446817 847 ntBASIC17.17■□□□□ 0.34
TRAV8-6A0A0B4J262 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC17.17■□□□□ 0.34
TRAV8-6A0A0B4J262 METRNL-202ENST00000570778 967 ntTSL 5 BASIC17.17■□□□□ 0.34
TRAV8-6A0A0B4J262 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC17.17■□□□□ 0.34
TRAV8-6A0A0B4J262 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC17.17■□□□□ 0.34
TRAV8-6A0A0B4J262 KAZALD1-201ENST00000370200 1913 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-6A0A0B4J262 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
TRAV8-6A0A0B4J262 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRAV8-6A0A0B4J262 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-6A0A0B4J262 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-6A0A0B4J262 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRAV8-6A0A0B4J262 CHST11-203ENST00000547956 936 ntTSL 2 BASIC17.16■□□□□ 0.34
TRAV8-6A0A0B4J262 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRAV8-6A0A0B4J262 RPIA-201ENST00000283646 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 33.5 ms