Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 PBX1-202ENST00000367897 1459 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.54
TRAV5A0A0B4J249 ZDHHC1-201ENST00000348579 2047 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
TRAV5A0A0B4J249 GP1BB-201ENST00000366425 1553 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV5A0A0B4J249 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV5A0A0B4J249 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC18.38■□□□□ 0.53
TRAV5A0A0B4J249 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
TRAV5A0A0B4J249 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
TRAV5A0A0B4J249 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC18.38■□□□□ 0.53
TRAV5A0A0B4J249 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC18.38■□□□□ 0.53
TRAV5A0A0B4J249 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV5A0A0B4J249 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV5A0A0B4J249 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV5A0A0B4J249 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV5A0A0B4J249 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV5A0A0B4J249 ZFYVE28-202ENST00000503000 1874 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV5A0A0B4J249 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV5A0A0B4J249 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.37■□□□□ 0.53
TRAV5A0A0B4J249 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC18.37■□□□□ 0.53
TRAV5A0A0B4J249 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.37■□□□□ 0.53
TRAV5A0A0B4J249 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV5A0A0B4J249 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV5A0A0B4J249 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV5A0A0B4J249 FEZ2-203ENST00000379245 2097 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
TRAV5A0A0B4J249 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV5A0A0B4J249 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC18.36■□□□□ 0.53
TRAV5A0A0B4J249 ST3GAL5-269ENST00000640992 2292 ntAPPRIS ALT2 TSL 5 BASIC18.36■□□□□ 0.53
TRAV5A0A0B4J249 ARG2-201ENST00000261783 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV5A0A0B4J249 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV5A0A0B4J249 SSTR5-201ENST00000293897 1362 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
TRAV5A0A0B4J249 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV5A0A0B4J249 RPS2P35-201ENST00000443417 897 ntBASIC18.35■□□□□ 0.53
TRAV5A0A0B4J249 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC18.35■□□□□ 0.53
TRAV5A0A0B4J249 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC18.35■□□□□ 0.53
TRAV5A0A0B4J249 LINC00543-201ENST00000567234 1845 ntBASIC18.35■□□□□ 0.53
TRAV5A0A0B4J249 BTBD7-205ENST00000554565 2697 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV5A0A0B4J249 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC18.35■□□□□ 0.53
TRAV5A0A0B4J249 GFOD1-204ENST00000603223 2388 ntTSL 2 BASIC18.34■□□□□ 0.53
TRAV5A0A0B4J249 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV5A0A0B4J249 AP000802.1-201ENST00000500537 1934 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV5A0A0B4J249 GRIN2D-201ENST00000263269 5093 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV5A0A0B4J249 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV5A0A0B4J249 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV5A0A0B4J249 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
TRAV5A0A0B4J249 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC18.34■□□□□ 0.53
TRAV5A0A0B4J249 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
TRAV5A0A0B4J249 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV5A0A0B4J249 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV5A0A0B4J249 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
TRAV5A0A0B4J249 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
TRAV5A0A0B4J249 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC18.33■□□□□ 0.52
TRAV5A0A0B4J249 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV5A0A0B4J249 HORMAD2-201ENST00000336726 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV5A0A0B4J249 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV5A0A0B4J249 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV5A0A0B4J249 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV5A0A0B4J249 TMEM64-203ENST00000458549 4997 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV5A0A0B4J249 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV5A0A0B4J249 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV5A0A0B4J249 LSM8-203ENST00000422760 1920 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV5A0A0B4J249 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
TRAV5A0A0B4J249 EPS8L1-205ENST00000586329 2130 ntTSL 5 BASIC18.32■□□□□ 0.52
TRAV5A0A0B4J249 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC18.32■□□□□ 0.52
TRAV5A0A0B4J249 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC18.31■□□□□ 0.52
TRAV5A0A0B4J249 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV5A0A0B4J249 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV5A0A0B4J249 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC18.31■□□□□ 0.52
TRAV5A0A0B4J249 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV5A0A0B4J249 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.31■□□□□ 0.52
TRAV5A0A0B4J249 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV5A0A0B4J249 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV5A0A0B4J249 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
TRAV5A0A0B4J249 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV5A0A0B4J249 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
TRAV5A0A0B4J249 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC18.3■□□□□ 0.52
TRAV5A0A0B4J249 TRIM28-202ENST00000341753 2709 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV5A0A0B4J249 ADSS-201ENST00000366535 2780 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV5A0A0B4J249 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV5A0A0B4J249 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC18.3■□□□□ 0.52
TRAV5A0A0B4J249 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV5A0A0B4J249 UNC50-204ENST00000409975 2172 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV5A0A0B4J249 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC18.3■□□□□ 0.52
TRAV5A0A0B4J249 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
TRAV5A0A0B4J249 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV5A0A0B4J249 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV5A0A0B4J249 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV5A0A0B4J249 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV5A0A0B4J249 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV5A0A0B4J249 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV5A0A0B4J249 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
TRAV5A0A0B4J249 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
TRAV5A0A0B4J249 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
TRAV5A0A0B4J249 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.29■□□□□ 0.52
TRAV5A0A0B4J249 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC18.29■□□□□ 0.52
TRAV5A0A0B4J249 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV5A0A0B4J249 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV5A0A0B4J249 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
TRAV5A0A0B4J249 TMUB1-202ENST00000392818 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV5A0A0B4J249 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
TRAV5A0A0B4J249 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC18.28■□□□□ 0.52
TRAV5A0A0B4J249 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 20.4 ms