Protein–RNA interactions for Protein: A0A0A0MS04

TRBV6-7, T-cell receptor beta variable 6-7 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-7A0A0A0MS04 TMEM104-205ENST00000582773 1740 ntTSL 2 BASIC19.88■□□□□ 0.77
TRBV6-7A0A0A0MS04 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV6-7A0A0A0MS04 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV6-7A0A0A0MS04 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC19.87■□□□□ 0.77
TRBV6-7A0A0A0MS04 GJC1-209ENST00000592524 1837 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
TRBV6-7A0A0A0MS04 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
TRBV6-7A0A0A0MS04 PLEKHA8-202ENST00000396257 1907 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV6-7A0A0A0MS04 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV6-7A0A0A0MS04 TST-202ENST00000403892 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV6-7A0A0A0MS04 EPHB2-207ENST00000544305 1709 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV6-7A0A0A0MS04 MACF1-219ENST00000484793 834 ntTSL 2 BASIC19.86■□□□□ 0.77
TRBV6-7A0A0A0MS04 MIR3648-2-201ENST00000581792 180 ntBASIC19.86■□□□□ 0.77
TRBV6-7A0A0A0MS04 MIR3648-1-201ENST00000615959 180 ntBASIC19.86■□□□□ 0.77
TRBV6-7A0A0A0MS04 GDI1-215ENST00000630693 786 ntTSL 4 BASIC19.86■□□□□ 0.77
TRBV6-7A0A0A0MS04 IQCJ-SCHIP1-201ENST00000412423 2067 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV6-7A0A0A0MS04 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV6-7A0A0A0MS04 RGS19-201ENST00000332298 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
TRBV6-7A0A0A0MS04 MFSD5-201ENST00000329548 1760 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV6-7A0A0A0MS04 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV6-7A0A0A0MS04 SCARA5-204ENST00000524352 1945 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV6-7A0A0A0MS04 ABHD17AP4-201ENST00000411545 909 ntBASIC19.85■□□□□ 0.77
TRBV6-7A0A0A0MS04 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
TRBV6-7A0A0A0MS04 PEX5-205ENST00000420616 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV6-7A0A0A0MS04 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV6-7A0A0A0MS04 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV6-7A0A0A0MS04 TRAP1-202ENST00000538171 2052 ntTSL 2 BASIC19.85■□□□□ 0.77
TRBV6-7A0A0A0MS04 BIN1-201ENST00000259238 2338 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
TRBV6-7A0A0A0MS04 SYNDIG1-201ENST00000376862 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV6-7A0A0A0MS04 UXS1-201ENST00000283148 2099 ntAPPRIS ALT1 TSL 2 BASIC19.84■□□□□ 0.77
TRBV6-7A0A0A0MS04 ZNF205-202ENST00000382192 2062 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV6-7A0A0A0MS04 HOXC9-201ENST00000303450 1516 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV6-7A0A0A0MS04 EED-207ENST00000528180 1745 ntTSL 5 BASIC19.84■□□□□ 0.77
TRBV6-7A0A0A0MS04 ZSCAN18-202ENST00000421612 1488 ntTSL 4 BASIC19.84■□□□□ 0.77
TRBV6-7A0A0A0MS04 AC097639.1-201ENST00000565519 1891 ntBASIC19.84■□□□□ 0.77
TRBV6-7A0A0A0MS04 CPNE2-202ENST00000535318 2316 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
TRBV6-7A0A0A0MS04 FNTA-201ENST00000302279 1840 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV6-7A0A0A0MS04 WIPI2-202ENST00000382384 1948 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TRBV6-7A0A0A0MS04 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV6-7A0A0A0MS04 MAL2-204ENST00000614891 2818 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV6-7A0A0A0MS04 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC19.82■□□□□ 0.76
TRBV6-7A0A0A0MS04 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC19.82■□□□□ 0.76
TRBV6-7A0A0A0MS04 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV6-7A0A0A0MS04 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV6-7A0A0A0MS04 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV6-7A0A0A0MS04 FAM124A-201ENST00000280057 2104 ntTSL 2 BASIC19.82■□□□□ 0.76
TRBV6-7A0A0A0MS04 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TRBV6-7A0A0A0MS04 ZNF707-222ENST00000532158 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TRBV6-7A0A0A0MS04 HMGA2-201ENST00000354636 1529 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV6-7A0A0A0MS04 KRT10-201ENST00000269576 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV6-7A0A0A0MS04 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV6-7A0A0A0MS04 METRNL-202ENST00000570778 967 ntTSL 5 BASIC19.81■□□□□ 0.76
TRBV6-7A0A0A0MS04 CLDN5-201ENST00000403084 2357 ntBASIC19.81■□□□□ 0.76
TRBV6-7A0A0A0MS04 HADH-209ENST00000603302 2032 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV6-7A0A0A0MS04 FAM181A-204ENST00000557000 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV6-7A0A0A0MS04 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TRBV6-7A0A0A0MS04 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV6-7A0A0A0MS04 FBXW5-201ENST00000325285 2274 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV6-7A0A0A0MS04 HDGFL2-210ENST00000621835 2255 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV6-7A0A0A0MS04 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV6-7A0A0A0MS04 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC19.8■□□□□ 0.76
TRBV6-7A0A0A0MS04 SOD3-201ENST00000382120 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TRBV6-7A0A0A0MS04 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC19.8■□□□□ 0.76
TRBV6-7A0A0A0MS04 LINC01124-201ENST00000409786 2117 ntBASIC19.79■□□□□ 0.76
TRBV6-7A0A0A0MS04 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC19.79■□□□□ 0.76
TRBV6-7A0A0A0MS04 MYCL-201ENST00000372815 1944 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV6-7A0A0A0MS04 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV6-7A0A0A0MS04 ANKRD20A11P-201ENST00000344693 1088 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV6-7A0A0A0MS04 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
TRBV6-7A0A0A0MS04 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC19.79■□□□□ 0.76
TRBV6-7A0A0A0MS04 TMEM203-201ENST00000343666 1557 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
TRBV6-7A0A0A0MS04 AP003733.4-201ENST00000623785 1697 ntBASIC19.78■□□□□ 0.76
TRBV6-7A0A0A0MS04 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV6-7A0A0A0MS04 GDI1-204ENST00000447750 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV6-7A0A0A0MS04 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV6-7A0A0A0MS04 RPL27A-206ENST00000530022 878 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV6-7A0A0A0MS04 AC016575.1-201ENST00000607026 382 ntBASIC19.78■□□□□ 0.76
TRBV6-7A0A0A0MS04 ABHD8-201ENST00000247706 2090 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV6-7A0A0A0MS04 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
TRBV6-7A0A0A0MS04 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
TRBV6-7A0A0A0MS04 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV6-7A0A0A0MS04 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV6-7A0A0A0MS04 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV6-7A0A0A0MS04 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC19.77■□□□□ 0.76
TRBV6-7A0A0A0MS04 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
TRBV6-7A0A0A0MS04 SLC6A10P-202ENST00000431994 2058 ntBASIC19.77■□□□□ 0.75
TRBV6-7A0A0A0MS04 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC19.77■□□□□ 0.75
TRBV6-7A0A0A0MS04 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV6-7A0A0A0MS04 CASP9-201ENST00000333868 2019 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV6-7A0A0A0MS04 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV6-7A0A0A0MS04 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC19.76■□□□□ 0.75
TRBV6-7A0A0A0MS04 TTC36-201ENST00000302783 874 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV6-7A0A0A0MS04 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC19.76■□□□□ 0.75
TRBV6-7A0A0A0MS04 PSPH-201ENST00000275605 2131 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV6-7A0A0A0MS04 TNFSF12-TNFSF13-201ENST00000293826 1816 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV6-7A0A0A0MS04 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
TRBV6-7A0A0A0MS04 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
TRBV6-7A0A0A0MS04 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV6-7A0A0A0MS04 SAMD4B-208ENST00000598913 2877 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV6-7A0A0A0MS04 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
TRBV6-7A0A0A0MS04 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms