Protein–RNA interactions for Protein: A0A075B6X5

TRAV18, T-cell receptor alpha variable 18 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV18A0A075B6X5 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV18A0A075B6X5 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRAV18A0A075B6X5 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV18A0A075B6X5 KLC3-202ENST00000470402 1820 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
TRAV18A0A075B6X5 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV18A0A075B6X5 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.31■□□□□ 0.84
TRAV18A0A075B6X5 HSD11B2-201ENST00000326152 1900 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV18A0A075B6X5 HSPBP1-201ENST00000255631 1768 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV18A0A075B6X5 RYK-209ENST00000623711 2934 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV18A0A075B6X5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV18A0A075B6X5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV18A0A075B6X5 IGFBP7-201ENST00000295666 1427 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV18A0A075B6X5 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV18A0A075B6X5 CHML-204ENST00000638121 920 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV18A0A075B6X5 MIR219A2-201ENST00000608502 1504 ntBASIC20.31■□□□□ 0.84
TRAV18A0A075B6X5 LRRC24-201ENST00000529415 1758 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRAV18A0A075B6X5 MRPS7-203ENST00000579002 1638 ntTSL 2 BASIC20.31■□□□□ 0.84
TRAV18A0A075B6X5 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC20.3■□□□□ 0.84
TRAV18A0A075B6X5 AL359258.2-201ENST00000564063 1566 ntBASIC20.3■□□□□ 0.84
TRAV18A0A075B6X5 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRAV18A0A075B6X5 SLC35B2-204ENST00000537814 1715 ntTSL 2 BASIC20.3■□□□□ 0.84
TRAV18A0A075B6X5 ZSCAN18-212ENST00000600404 1934 ntAPPRIS ALT2 TSL 2 BASIC20.29■□□□□ 0.84
TRAV18A0A075B6X5 NAGLU-201ENST00000225927 2544 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV18A0A075B6X5 CTSF-201ENST00000310325 2035 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRAV18A0A075B6X5 CEBPD-201ENST00000408965 2178 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
TRAV18A0A075B6X5 AC141586.4-201ENST00000624558 1573 ntBASIC20.29■□□□□ 0.84
TRAV18A0A075B6X5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC20.29■□□□□ 0.84
TRAV18A0A075B6X5 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV18A0A075B6X5 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV18A0A075B6X5 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV18A0A075B6X5 HYAL2-207ENST00000442581 2318 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
TRAV18A0A075B6X5 CHKA-202ENST00000356135 1755 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV18A0A075B6X5 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRAV18A0A075B6X5 FGF20-201ENST00000180166 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAV18A0A075B6X5 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.27■□□□□ 0.84
TRAV18A0A075B6X5 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC20.27■□□□□ 0.84
TRAV18A0A075B6X5 SLC22A18-201ENST00000312221 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV18A0A075B6X5 RSPH1-201ENST00000291536 1430 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV18A0A075B6X5 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC20.27■□□□□ 0.83
TRAV18A0A075B6X5 C15orf59-201ENST00000379822 1342 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV18A0A075B6X5 SMOX-201ENST00000278795 2164 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
TRAV18A0A075B6X5 HOXA10-206ENST00000613671 2175 ntTSL 5 BASIC20.27■□□□□ 0.83
TRAV18A0A075B6X5 TXNRD2-201ENST00000334363 1893 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV18A0A075B6X5 MLST8-219ENST00000565250 1588 ntAPPRIS P3 TSL 3 BASIC20.26■□□□□ 0.83
TRAV18A0A075B6X5 C1QL2-201ENST00000272520 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV18A0A075B6X5 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV18A0A075B6X5 AL162393.1-201ENST00000437852 946 ntBASIC20.26■□□□□ 0.83
TRAV18A0A075B6X5 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV18A0A075B6X5 KCNG2-201ENST00000316249 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV18A0A075B6X5 ARSB-206ENST00000565165 1772 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAV18A0A075B6X5 ARHGEF9-210ENST00000623517 2143 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAV18A0A075B6X5 PHYH-201ENST00000263038 1577 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV18A0A075B6X5 HEXDC-202ENST00000337014 2285 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV18A0A075B6X5 YBX2-201ENST00000007699 1590 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV18A0A075B6X5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAV18A0A075B6X5 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRAV18A0A075B6X5 AC008813.1-201ENST00000536597 885 ntBASIC20.25■□□□□ 0.83
TRAV18A0A075B6X5 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.25■□□□□ 0.83
TRAV18A0A075B6X5 DACT3-201ENST00000300875 2526 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAV18A0A075B6X5 RUNX1-205ENST00000399240 1590 ntTSL 3 BASIC20.25■□□□□ 0.83
TRAV18A0A075B6X5 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV18A0A075B6X5 TM6SF1-204ENST00000379390 1638 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV18A0A075B6X5 GOLGA7-201ENST00000357743 2027 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV18A0A075B6X5 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAV18A0A075B6X5 CHST11-202ENST00000546689 756 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAV18A0A075B6X5 LTBP3-212ENST00000529189 1997 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAV18A0A075B6X5 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 ATPAF1-213ENST00000574428 1760 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 SMOX-203ENST00000339123 2074 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 GAL3ST2-201ENST00000192314 1370 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 SCN1B-201ENST00000262631 1670 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 ZNF784-202ENST00000591479 1559 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 AC148477.6-201ENST00000623746 465 ntBASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 IRX5-201ENST00000320990 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 CCSER2-202ENST00000359979 2066 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 PCYT2-204ENST00000570388 1474 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 C3orf80-201ENST00000326474 2718 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 DUSP8P5-201ENST00000422884 1815 ntBASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 DGCR6-208ENST00000608842 1837 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAV18A0A075B6X5 BSCL2-205ENST00000403550 1693 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
TRAV18A0A075B6X5 ITGB3-202ENST00000571680 1668 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV18A0A075B6X5 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
TRAV18A0A075B6X5 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
TRAV18A0A075B6X5 WNT11-201ENST00000322563 1930 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV18A0A075B6X5 CNTFR-201ENST00000351266 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV18A0A075B6X5 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAV18A0A075B6X5 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC20.22■□□□□ 0.83
TRAV18A0A075B6X5 TAZ-216ENST00000613002 1485 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV18A0A075B6X5 DNAJB11-201ENST00000265028 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRAV18A0A075B6X5 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.21■□□□□ 0.83
TRAV18A0A075B6X5 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV18A0A075B6X5 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRAV18A0A075B6X5 RRAS2-201ENST00000256196 1516 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV18A0A075B6X5 AQP10-201ENST00000324978 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRAV18A0A075B6X5 CCDC71L-201ENST00000315965 1575 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
TRAV18A0A075B6X5 INPP5J-206ENST00000404453 1613 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRAV18A0A075B6X5 ZFP91-CNTF-201ENST00000389919 2319 ntAPPRIS P5 TSL 2 BASIC20.2■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 13.4 ms