Protein–RNA interactions for Protein: Q9Y696

CLIC4, Chloride intracellular channel protein 4, humanhuman

Predictions only

Length 253 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIC4Q9Y696 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 STAC-201ENST00000273183 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC18.79■□□□□ 0.6
CLIC4Q9Y696 CDK11B-204ENST00000407249 2677 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 SATB2-206ENST00000457245 2656 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 BTNL9-201ENST00000327705 3500 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 SFTPA2-201ENST00000372325 2189 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 ATP6AP2-201ENST00000378438 2022 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 NDUFA6-AS1-203ENST00000439129 2950 ntTSL 5 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 KRT18P2-201ENST00000447938 1258 ntBASIC18.78■□□□□ 0.6
CLIC4Q9Y696 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 AQP6-205ENST00000618286 829 ntTSL 5 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 BIN3-201ENST00000276416 1835 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 DUSP8-201ENST00000331588 4455 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 DCP1B-202ENST00000535873 2231 ntTSL 2 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 GPR89B-201ENST00000314163 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 NOL4L-210ENST00000616976 1376 ntTSL 5 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CLIC4Q9Y696 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 CLDND1-222ENST00000510545 2124 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 KDM6A-213ENST00000611820 5924 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 AC104109.2-201ENST00000602919 1418 ntBASIC18.77■□□□□ 0.6
CLIC4Q9Y696 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 BBS5-201ENST00000295240 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 VMO1-203ENST00000416307 712 ntTSL 2 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 FALEC-201ENST00000416894 566 ntTSL 3 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 AC034105.1-201ENST00000563488 319 ntBASIC18.77■□□□□ 0.6
CLIC4Q9Y696 AC018845.2-201ENST00000568326 409 ntBASIC18.77■□□□□ 0.6
CLIC4Q9Y696 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 AL009183.1-201ENST00000603760 355 ntBASIC18.77■□□□□ 0.6
CLIC4Q9Y696 LMNB2-201ENST00000325327 4671 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 CALB2-202ENST00000349553 1373 ntTSL 5 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 GUCD1-203ENST00000404664 1606 ntTSL 2 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
CLIC4Q9Y696 AC092919.2-201ENST00000623631 1645 ntBASIC18.77■□□□□ 0.6
CLIC4Q9Y696 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC18.77■□□□□ 0.59
CLIC4Q9Y696 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLIC4Q9Y696 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLIC4Q9Y696 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLIC4Q9Y696 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLIC4Q9Y696 AC069224.1-201ENST00000566372 1715 ntBASIC18.77■□□□□ 0.59
CLIC4Q9Y696 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLIC4Q9Y696 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
CLIC4Q9Y696 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
CLIC4Q9Y696 MPP3-201ENST00000398389 2182 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIC4Q9Y696 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
CLIC4Q9Y696 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
CLIC4Q9Y696 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC18.76■□□□□ 0.59
CLIC4Q9Y696 PIK3R6-203ENST00000614407 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
CLIC4Q9Y696 AC006063.2-201ENST00000640161 1696 ntTSL 5 BASIC18.76■□□□□ 0.59
CLIC4Q9Y696 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC18.76■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms