Protein–RNA interactions for Protein: Q9Y282

ERGIC3, Endoplasmic reticulum-Golgi intermediate compartment protein 3, humanhuman

Predictions only

Length 383 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3Q9Y282 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC15.11■□□□□ 0.01
ERGIC3Q9Y282 RGR-202ENST00000359452 2247 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
ERGIC3Q9Y282 PTPRH-201ENST00000263434 3343 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 TYSND1-202ENST00000335494 3397 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 MBD1-224ENST00000591416 4905 ntAPPRIS P3 TSL 5 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 AP000866.1-201ENST00000499143 2886 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 AK2-201ENST00000354858 1021 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 ANKRD20A18P-201ENST00000359341 492 ntBASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 KLF4P1-201ENST00000412782 1185 ntBASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 PEX26-203ENST00000428061 815 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 SRP19-202ENST00000445150 833 ntTSL 2 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 GXYLT1P3-201ENST00000453058 1193 ntBASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 AC066615.1-201ENST00000640911 628 ntBASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 KCNC2-208ENST00000549446 5625 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 LATS1-202ENST00000392273 2567 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 CLEC18A-203ENST00000449317 1875 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 PRMT2-208ENST00000451211 1878 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.1■□□□□ 0.01
ERGIC3Q9Y282 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 NDFIP2-201ENST00000218652 4625 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 SEPT8-208ENST00000378721 1723 ntTSL 5 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 FOS-208ENST00000555686 1496 ntTSL 2 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 PPP1R37-201ENST00000221462 3163 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 PHF10-205ENST00000612128 4395 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 CD70-202ENST00000423145 881 ntTSL 2 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 SNORA78-201ENST00000459373 127 ntBASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 ZNF398-203ENST00000483892 2121 ntTSL 5 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 AC092597.1-201ENST00000487352 616 ntBASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 DUX4L17-201ENST00000557360 1267 ntBASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 AC009237.3-202ENST00000608013 3042 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 AC006486.2-201ENST00000624246 2199 ntBASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 MED25-202ENST00000538643 1623 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 KCNN2-201ENST00000264773 2512 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 KLF11-201ENST00000305883 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 MINDY1-202ENST00000361738 1961 ntTSL 2 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 GGT3P-204ENST00000453783 1664 ntBASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 AC004706.4-201ENST00000634965 3537 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 PSMD9-201ENST00000261817 2307 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 KIFC3-207ENST00000543930 3018 ntTSL 2 BASIC15.09■□□□□ 0.01
ERGIC3Q9Y282 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ERGIC3Q9Y282 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ERGIC3Q9Y282 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
ERGIC3Q9Y282 LCK-206ENST00000373564 2137 ntTSL 5 BASIC15.08■□□□□ 0.01
ERGIC3Q9Y282 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC15.08■□□□□ 0.01
ERGIC3Q9Y282 NELFA-203ENST00000411638 2199 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
ERGIC3Q9Y282 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0.01
ERGIC3Q9Y282 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
ERGIC3Q9Y282 AL035460.1-201ENST00000380593 1866 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 36.1 ms