Protein–RNA interactions for Protein: Q9UN71

PCDHGB4, Protocadherin gamma-B4, humanhuman

Predictions only

Length 923 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB4Q9UN71 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 SAP130-203ENST00000357702 4173 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 INPP5B-202ENST00000373023 4694 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
PCDHGB4Q9UN71 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 CSNK1D-204ENST00000398519 1580 ntTSL 5 BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 LGALS3BP-218ENST00000591778 1961 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 AL022326.1-202ENST00000641533 845 ntBASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 COPS3-212ENST00000539941 1699 ntTSL 2 BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 KCNS1-201ENST00000306117 4538 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 ANKRD23-201ENST00000318357 2597 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PCDHGB4Q9UN71 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 KRT8P49-201ENST00000604166 1432 ntBASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 CCZ1-207ENST00000628813 2218 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 GRIN2A-201ENST00000330684 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 PARD3B-204ENST00000406610 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 AL139300.1-201ENST00000472726 2505 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 MROH1-201ENST00000326134 5183 ntAPPRIS P3 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 ORAOV1-201ENST00000279147 2478 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 LIMK2-203ENST00000340552 2789 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 ZNF276-201ENST00000289816 4589 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 BX005266.1-201ENST00000473402 457 ntBASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 NID1-201ENST00000264187 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 ING5-213ENST00000636051 4199 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC16.03■□□□□ 0.16
PCDHGB4Q9UN71 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
PCDHGB4Q9UN71 SUCO-204ENST00000608151 5790 ntTSL 5 BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.5 ms