Protein–RNA interactions for Protein: Q9UBN7

HDAC6, Histone deacetylase 6, humanhuman

Predictions only

Length 1,215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6Q9UBN7 C17orf62-201ENST00000306645 2093 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 FRMD8P1-201ENST00000440433 1524 ntBASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 AC021148.1-201ENST00000513652 1532 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 CD81-202ENST00000381036 880 ntTSL 3 BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 HNRNPA1P40-201ENST00000426371 1278 ntBASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 IGHV3-42-201ENST00000520410 361 ntBASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 RN7SL204P-201ENST00000582831 262 ntBASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 AL390754.1-201ENST00000619088 582 ntBASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 SCUBE2-207ENST00000520467 3148 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 GOLGA2-213ENST00000610329 2212 ntTSL 2 BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 AC078925.2-201ENST00000624013 1973 ntBASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
HDAC6Q9UBN7 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 C21orf58-201ENST00000291691 2975 ntAPPRIS P3 TSL 2 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 AL662844.4-201ENST00000606367 2838 ntBASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 SCLT1-205ENST00000503401 1604 ntAPPRIS ALT2 TSL 3 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 IL32-206ENST00000440815 920 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 AC002472.2-201ENST00000442739 958 ntBASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 IL32-207ENST00000444393 892 ntAPPRIS P4 TSL 2 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 IL32-219ENST00000531965 746 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 IL32-226ENST00000548476 1014 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 AC015712.4-202ENST00000558641 1007 ntTSL 4 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 EIF4ENIF1-206ENST00000397525 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 LRP11-201ENST00000239367 3260 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 HPN-202ENST00000392226 1783 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 EFEMP1-202ENST00000394555 3024 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.6■□□□□ 0.57
HDAC6Q9UBN7 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 HDAC10-205ENST00000448072 2133 ntTSL 5 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 SPG11-215ENST00000559193 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 BCRP2-201ENST00000398241 1842 ntTSL 2 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 SRP19-201ENST00000282999 937 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 AL807752.3-201ENST00000456356 748 ntTSL 2 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 AC097493.3-201ENST00000509725 367 ntBASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 LINC02012-201ENST00000608206 1725 ntBASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 NARF-206ENST00000457415 1668 ntTSL 5 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 ABTB1-201ENST00000232744 1965 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 TTC8-216ENST00000614125 2377 ntTSL 5 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC18.59■□□□□ 0.57
HDAC6Q9UBN7 PCDHA1-201ENST00000378133 2726 ntBASIC18.58■□□□□ 0.57
HDAC6Q9UBN7 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC18.58■□□□□ 0.57
HDAC6Q9UBN7 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC18.58■□□□□ 0.57
HDAC6Q9UBN7 KRT8P49-201ENST00000604166 1432 ntBASIC18.58■□□□□ 0.57
HDAC6Q9UBN7 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC18.58■□□□□ 0.57
HDAC6Q9UBN7 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC18.58■□□□□ 0.57
HDAC6Q9UBN7 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms