Protein–RNA interactions for Protein: Q9P2V4

LRIT1, Leucine-rich repeat, immunoglobulin-like domain and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIT1Q9P2V4 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 AC020916.1-201ENST00000587762 1774 ntBASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 PRDX5-202ENST00000347941 463 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 AC007388.1-210ENST00000415640 458 ntTSL 3 BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 AC005034.1-201ENST00000426657 489 ntBASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 BANF1P1-201ENST00000553684 263 ntBASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 MYMX-202ENST00000576476 682 ntAPPRIS P1 TSL 3 BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 AC004233.3-201ENST00000607794 1269 ntBASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 RASA4-202ENST00000449970 2787 ntAPPRIS ALT1 TSL 2 BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 PDX1-201ENST00000381033 2501 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRIT1Q9P2V4 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 CXCL6-201ENST00000226317 1718 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 KIAA1324L-207ENST00000444627 3527 ntTSL 5 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 GOLGA2P2Y-202ENST00000423852 1506 ntBASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 AL589702.1-201ENST00000641229 1509 ntBASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 RPS19-201ENST00000221975 500 ntTSL 3 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 CCDC84-201ENST00000334418 1202 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 PIN1P1-201ENST00000412108 996 ntBASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 AL669831.5-201ENST00000434264 844 ntTSL 5 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 PAX5-207ENST00000446742 885 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 AC137894.1-201ENST00000526431 547 ntTSL 2 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 RBM7-207ENST00000544582 692 ntTSL 3 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 ALKBH7-203ENST00000599849 556 ntTSL 3 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 AL603756.1-201ENST00000606511 2163 ntBASIC15.85■□□□□ 0.13
LRIT1Q9P2V4 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 LAT-202ENST00000360872 1459 ntAPPRIS P3 TSL 2 BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 AC006538.1-201ENST00000567905 1585 ntBASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 SMARCA4-201ENST00000344626 5392 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 LETM2-201ENST00000297720 1693 ntTSL 2 BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 SNRPB-201ENST00000381342 1154 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 METTL26-204ENST00000397665 558 ntTSL 2 BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 WBP2-203ENST00000433525 928 ntTSL 2 BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 CRB3P1-201ENST00000449338 276 ntBASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 AKIP1-211ENST00000534506 576 ntTSL 3 BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 AL079307.3-201ENST00000556114 283 ntBASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 AC027307.3-201ENST00000594262 1100 ntBASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 AL133215.2-201ENST00000609242 977 ntBASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC15.84■□□□□ 0.13
LRIT1Q9P2V4 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 29.1 ms