Protein–RNA interactions for Protein: Q9NR96

TLR9, Toll-like receptor 9, humanhuman

Predictions only

Length 1,032 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TLR9Q9NR96 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 NAA38-206ENST00000576384 424 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 AC061975.2-201ENST00000581722 295 ntBASIC17.36■□□□□ 0.37
TLR9Q9NR96 Six3os1_5.1-201ENST00000611000 271 ntBASIC17.36■□□□□ 0.37
TLR9Q9NR96 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 CRTAC1-201ENST00000309155 1946 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 TRAPPC3-210ENST00000617904 1305 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 MRPS21-201ENST00000581066 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 AP1S2-201ENST00000329235 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
TLR9Q9NR96 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TLR9Q9NR96 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 RNF34-202ENST00000392464 1722 ntTSL 5 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 SPATC1-201ENST00000377470 2007 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 WLS-205ENST00000370976 2332 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 LYPLA2-201ENST00000374501 1117 ntTSL 2 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 IFITM3-201ENST00000399808 808 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 PARP8-218ENST00000513738 596 ntTSL 4 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 GLI4-203ENST00000517468 963 ntTSL 5 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 AL928654.4-206ENST00000551180 980 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 APOC4-201ENST00000591600 348 ntTSL 3 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 AC099568.2-201ENST00000609194 695 ntBASIC17.35■□□□□ 0.37
TLR9Q9NR96 CBSL-202ENST00000617706 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 WDR45-201ENST00000322995 1444 ntTSL 5 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 LMF1-AS1-202ENST00000569574 1408 ntTSL 3 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 ZNF57-201ENST00000306908 2003 ntAPPRIS P2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 ZNF57-205ENST00000614108 2002 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 PBK-201ENST00000301905 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
TLR9Q9NR96 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
TLR9Q9NR96 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 PHF20L1-201ENST00000220847 3297 ntTSL 5 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 SLC12A4-201ENST00000316341 4765 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 NDUFS8-201ENST00000313468 791 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 AC091729.1-201ENST00000449721 869 ntTSL 3 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 AC023310.3-201ENST00000557027 670 ntBASIC17.34■□□□□ 0.37
TLR9Q9NR96 AC100756.1-201ENST00000562736 682 ntBASIC17.34■□□□□ 0.37
TLR9Q9NR96 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 AC138749.3-201ENST00000567691 622 ntBASIC17.34■□□□□ 0.37
TLR9Q9NR96 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 PIH1D1-209ENST00000596049 992 ntAPPRIS P1 TSL 5 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 AC116165.1-201ENST00000611806 668 ntBASIC17.34■□□□□ 0.37
TLR9Q9NR96 AC020765.3-201ENST00000613051 740 ntBASIC17.34■□□□□ 0.37
TLR9Q9NR96 MIR6069-201ENST00000620069 79 ntBASIC17.34■□□□□ 0.37
TLR9Q9NR96 GPS1-228ENST00000624957 1825 ntAPPRIS ALT1 TSL 5 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 YAP1-209ENST00000537274 5350 ntAPPRIS ALT2 TSL 5 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
TLR9Q9NR96 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
TLR9Q9NR96 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
TLR9Q9NR96 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
TLR9Q9NR96 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
TLR9Q9NR96 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.33■□□□□ 0.37
TLR9Q9NR96 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 38.5 ms