Protein–RNA interactions for Protein: Q9H1D9

POLR3F, DNA-directed RNA polymerase III subunit RPC6, humanhuman

Predicted RBP Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3FQ9H1D9 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 LLGL2-209ENST00000578363 1393 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 ARHGAP11B-201ENST00000428041 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 YAE1D1-202ENST00000432096 968 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 AC125807.1-201ENST00000483097 614 ntBASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 AC067863.1-201ENST00000494933 530 ntBASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 SLC30A5-203ENST00000502979 681 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 AC051619.7-201ENST00000568314 623 ntBASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 AL355385.1-201ENST00000606123 409 ntBASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 AC003101.2-201ENST00000612557 442 ntBASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 ELN-206ENST00000380553 2703 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 NRSN1-203ENST00000378478 2408 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
POLR3FQ9H1D9 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 PGRMC2-208ENST00000613358 3783 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 XXYLT1-204ENST00000429994 865 ntTSL 3 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 PPP6R2P1-201ENST00000450880 1275 ntBASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 KLF2P3-201ENST00000451977 1087 ntBASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 TAGLN-206ENST00000530649 1227 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 PCDHA14-201ENST00000506751 2298 ntBASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 SLC29A2-205ENST00000544554 2505 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 ME2P1-201ENST00000426028 1970 ntBASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLR3FQ9H1D9 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 ISG20L2-202ENST00000368219 2310 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 AC079328.2-201ENST00000561241 3354 ntBASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 DDT-201ENST00000350608 671 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 WDR25-203ENST00000542471 1214 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 LINC01089-211ENST00000543334 1282 ntTSL 4 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 DUX4L27-201ENST00000554796 1261 ntBASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 LHCGR-203ENST00000403273 1921 ntTSL 5 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 TSC22D4-201ENST00000300181 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 TXNDC2-201ENST00000306084 1873 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLR3FQ9H1D9 HEPN1-201ENST00000408930 1434 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 58 ms