Protein–RNA interactions for Protein: Q9H0A8

COMMD4, COMM domain-containing protein 4, humanhuman

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4Q9H0A8 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 CLPTM1L-209ENST00000507807 1740 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 RMI2-205ENST00000576027 818 ntTSL 2 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 AL591684.3-201ENST00000605187 298 ntBASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 NID2-208ENST00000617139 3827 ntTSL 5 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 CCNA2-202ENST00000618014 2797 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 LINC01144-201ENST00000626198 1710 ntBASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 CCNC-219ENST00000627680 896 ntTSL 5 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 AP001189.5-201ENST00000637683 1413 ntTSL 5 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 AL022326.1-202ENST00000641533 845 ntBASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 CLEC18A-209ENST00000615430 2215 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 CLEC18C-211ENST00000618957 2215 ntAPPRIS P2 TSL 5 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 CLEC18B-205ENST00000619275 2215 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 RAP1GDS1-203ENST00000380158 2085 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 SSB-202ENST00000409333 1782 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 SNX33P1-201ENST00000592116 1762 ntBASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 FUNDC2-201ENST00000369498 6455 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 PCBP3-204ENST00000400309 1986 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 LRRC20-206ENST00000395011 2903 ntTSL 4 BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 CES1-202ENST00000361503 1835 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
COMMD4Q9H0A8 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 SURF4-207ENST00000545297 2863 ntTSL 2 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 SLC25A48-203ENST00000425402 2062 ntTSL 5 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 CYP1B1-205ENST00000610745 5250 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 AP005117.1-201ENST00000584346 1413 ntBASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 MAGI2-AS3-203ENST00000424477 520 ntTSL 4 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 WDR53-204ENST00000433160 887 ntTSL 5 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 MPI-205ENST00000562606 1052 ntTSL 3 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 AC091167.2-201ENST00000579581 588 ntBASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 MIR3180-1-201ENST00000580374 94 ntBASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 MIR3180-3-201ENST00000584616 94 ntBASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 AC069148.1-201ENST00000608741 768 ntBASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 SDR16C5-201ENST00000303749 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 FOLH1-201ENST00000256999 2635 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 ARFGAP1-210ENST00000519273 3176 ntTSL 2 BASIC14.61□□□□□ -0.07
COMMD4Q9H0A8 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 TM2D3-201ENST00000333202 1381 ntAPPRIS P4 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 LINC00668-206ENST00000581725 1902 ntTSL 2 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 SYDE1-204ENST00000600440 3058 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 SNX6-202ENST00000396526 3398 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 MEF2D-201ENST00000348159 5965 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 MED16-201ENST00000269814 1199 ntTSL 5 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 COPS8-203ENST00000409334 794 ntTSL 5 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 BET1L-206ENST00000486280 665 ntTSL 3 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
COMMD4Q9H0A8 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC14.6□□□□□ -0.07
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms