Protein–RNA interactions for Protein: Q9C0A0

CNTNAP4, Contactin-associated protein-like 4, humanhuman

Predictions only

Length 1,308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP4Q9C0A0 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 AC092933.1-201ENST00000393644 945 ntBASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 NME6-203ENST00000415644 849 ntTSL 2 BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 AC245100.5-201ENST00000452108 331 ntBASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 RMDN1-212ENST00000519966 1164 ntTSL 2 BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 AP001889.1-201ENST00000525414 633 ntBASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 RAB30-AS1-207ENST00000533708 825 ntTSL 2 BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 AP000812.2-201ENST00000538934 718 ntBASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 RIC8A-217ENST00000626818 159 ntTSL 5 BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 RSPH6A-201ENST00000221538 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 KRT8P37-201ENST00000451609 1420 ntBASIC20.41■□□□□ 0.86
CNTNAP4Q9C0A0 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 KBTBD2-201ENST00000304056 3745 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 TARDBPP1-201ENST00000442013 1203 ntBASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 BCRP2-202ENST00000447763 634 ntBASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 TAF8-204ENST00000456846 1293 ntAPPRIS ALT1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 BCRP6-201ENST00000510112 632 ntBASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 BCRP7-201ENST00000511549 544 ntBASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 ENPP7P5-201ENST00000541031 1031 ntBASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 IGHM-202ENST00000637539 1683 ntAPPRIS P5 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 RHOBTB3-201ENST00000379982 5537 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 CACNA1H-202ENST00000358590 8069 ntAPPRIS ALT2 TSL 5 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 RNPS1-223ENST00000568631 1792 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
CNTNAP4Q9C0A0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNTNAP4Q9C0A0 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNTNAP4Q9C0A0 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
CNTNAP4Q9C0A0 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNTNAP4Q9C0A0 RNF165-204ENST00000587853 2011 ntTSL 5 BASIC20.39■□□□□ 0.86
CNTNAP4Q9C0A0 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNTNAP4Q9C0A0 GRN-214ENST00000589265 1632 ntTSL 5 BASIC20.39■□□□□ 0.86
CNTNAP4Q9C0A0 TP73-213ENST00000604479 1623 ntTSL 5 BASIC20.39■□□□□ 0.86
CNTNAP4Q9C0A0 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.86
CNTNAP4Q9C0A0 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 GZMB-202ENST00000382540 816 ntTSL 5 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 RPL28-203ENST00000428193 573 ntTSL 2 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 RPL28-207ENST00000558815 616 ntTSL 2 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 LILRA2-208ENST00000629481 661 ntTSL 2 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 INTS4P2-202ENST00000614726 2019 ntBASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 PANX1-201ENST00000227638 2769 ntAPPRIS P2 TSL 1 (best) BASIC20.39■□□□□ 0.85
CNTNAP4Q9C0A0 SGK3-206ENST00000520976 2483 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC20.38■□□□□ 0.85
CNTNAP4Q9C0A0 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC20.38■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 54.3 ms