Protein–RNA interactions for Protein: Q9BZA8

PCDH11Y, Protocadherin-11 Y-linked, humanhuman

Predictions only

Length 1,340 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11YQ9BZA8 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC21.09■□□□□ 0.97
PCDH11YQ9BZA8 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 UCHL3-201ENST00000377595 844 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 ZNF815P-202ENST00000422825 805 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 SFTPC-202ENST00000437090 773 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 AL606534.2-205ENST00000437691 346 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 GNG2-209ENST00000555472 908 ntAPPRIS P1 TSL 3 BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 AC009133.2-201ENST00000566537 547 ntTSL 4 BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 AC036164.1-201ENST00000570544 333 ntBASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC21.08■□□□□ 0.97
PCDH11YQ9BZA8 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH11YQ9BZA8 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH11YQ9BZA8 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC21.08■□□□□ 0.96
PCDH11YQ9BZA8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH11YQ9BZA8 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
PCDH11YQ9BZA8 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 TFF2-201ENST00000291526 737 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 IP6K1-203ENST00000460540 1260 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 HACD3-202ENST00000442729 1332 ntTSL 2 BASIC21.07■□□□□ 0.96
PCDH11YQ9BZA8 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 LINC01273-201ENST00000411453 685 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 RN7SL399P-201ENST00000471648 279 ntBASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 PIGL-212ENST00000581006 554 ntTSL 4 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 TRIM8-201ENST00000302424 2831 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 DNAJB8-AS1-201ENST00000471626 1798 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 NFIA-205ENST00000371189 1989 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC21.06■□□□□ 0.96
PCDH11YQ9BZA8 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 AL442647.2-201ENST00000429864 857 ntBASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 KRT43P-201ENST00000434019 910 ntBASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 AC104989.1-201ENST00000519711 778 ntBASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 C11orf98-202ENST00000525675 405 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 BTNL10-201ENST00000595971 695 ntBASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 AC233724.13-201ENST00000598383 410 ntBASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 TSPAN12-202ENST00000415871 1495 ntAPPRIS P1 TSL 5 BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
PCDH11YQ9BZA8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
Retrieved 100 of 98,524 protein–RNA pairs in 45.9 ms