Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 PENK-201ENST00000314922 1199 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 AC139713.2-206ENST00000499587 566 ntTSL 4 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 RNF24-204ENST00000545616 1128 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 AC027307.2-201ENST00000591252 911 ntBASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 AF228730.6-201ENST00000641497 218 ntBASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 AC084121.3-201ENST00000641716 218 ntBASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 AC105233.6-201ENST00000642093 218 ntBASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 DIMT1-201ENST00000199320 2859 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
RPAP1Q9BWH6 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 SIN3B-206ENST00000595541 2767 ntTSL 2 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 AP2A2-222ENST00000534328 1491 ntTSL 5 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 PIKFYVE-204ENST00000407449 1898 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 CICP6-201ENST00000457191 2729 ntBASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 LINC00398-201ENST00000414407 906 ntTSL 2 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 CCDC74BP1-201ENST00000508880 1123 ntBASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 CCDC120-203ENST00000536628 2381 ntAPPRIS ALT2 TSL 2 BASIC19.93■□□□□ 0.78
RPAP1Q9BWH6 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 GCK-209ENST00000616242 2260 ntTSL 5 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 ME2P1-201ENST00000426028 1970 ntBASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 UBL3-201ENST00000380680 4384 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 DHRS1-201ENST00000288111 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 AC142381.1-201ENST00000426099 345 ntBASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 AC092580.3-201ENST00000430932 139 ntBASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 OARD1-208ENST00000469104 704 ntTSL 2 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 AC016168.1-201ENST00000591422 722 ntTSL 3 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 OARD1-216ENST00000628419 1188 ntTSL 5 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 UIMC1-201ENST00000377227 2570 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 CTDP1-201ENST00000075430 3538 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC19.92■□□□□ 0.78
RPAP1Q9BWH6 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 CCDC183-201ENST00000338005 1671 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 SH2D2A-202ENST00000368199 1658 ntAPPRIS P3 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 ABLIM2-202ENST00000361581 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 NKG7-201ENST00000221978 843 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 AC015922.1-201ENST00000421102 1152 ntBASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 TSPY16P-201ENST00000449843 468 ntBASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 AC106795.3-201ENST00000511650 547 ntTSL 4 BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 NKG7-205ENST00000600427 520 ntTSL 3 BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 AL031731.1-201ENST00000642131 2094 ntBASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 PRKCSH-217ENST00000592741 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 ZNF446-201ENST00000335841 1889 ntTSL 5 BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 LTF-203ENST00000426532 2494 ntTSL 2 BASIC19.91■□□□□ 0.78
RPAP1Q9BWH6 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms