Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 AC008608.2-201ENST00000606089 416 ntBASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 AC244517.11-201ENST00000624192 573 ntTSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 CR381653.1-203ENST00000625153 577 ntTSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 AF228730.7-201ENST00000641842 219 ntBASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 PES1-202ENST00000354694 2295 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 HS6ST2-201ENST00000370833 1938 ntTSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 ASAH1-254ENST00000637636 2218 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 PPP2R5D-202ENST00000394110 2894 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 ARMC5-204ENST00000538189 3017 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 LINC01529-205ENST00000637365 2000 ntTSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 GOLGA2P3Y-201ENST00000416946 1653 ntBASIC13.95□□□□□ -0.18
HDHD3Q9BSH5 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 GATA4-206ENST00000528712 2614 ntTSL 2 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 LINC02447-202ENST00000501888 2146 ntBASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 MIEF1-202ENST00000402881 2269 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 AL354813.1-201ENST00000526566 2437 ntTSL 5 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 ANKRD26P3-201ENST00000454044 2748 ntBASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 HHIP-202ENST00000434550 1770 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 XPO5-201ENST00000265351 5364 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 CDC14C-201ENST00000428251 1719 ntBASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 AQP12A-202ENST00000429564 1110 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 C1RL-210ENST00000544702 1569 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 AC073957.2-201ENST00000549241 1562 ntTSL 4 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 PAM16-208ENST00000573553 722 ntTSL 2 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 LINC01144-201ENST00000626198 1710 ntBASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 LCMT2-202ENST00000567039 1545 ntTSL 2 BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 EPB41L4A-AS1-201ENST00000413221 2969 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 CNKSR1-202ENST00000374253 2538 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 TNKS1BP1-207ENST00000532437 5952 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 SEMA4C-201ENST00000305476 3545 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 AP005117.1-202ENST00000581724 1908 ntBASIC13.94□□□□□ -0.18
HDHD3Q9BSH5 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 TSPOAP1-202ENST00000343736 5947 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 ALOX15-205ENST00000574640 2422 ntTSL 2 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 NOVA2-201ENST00000263257 7803 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 CDK2AP2P3-201ENST00000422476 372 ntBASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 WDR53-204ENST00000433160 887 ntTSL 5 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 POU5F1P6-201ENST00000466990 990 ntBASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 KRT18P31-201ENST00000506277 1292 ntBASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC13.93□□□□□ -0.18
HDHD3Q9BSH5 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC13.93□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 26.7 ms