Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NDNQ99608 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDNQ99608 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDNQ99608 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC16.58■□□□□ 0.24
NDNQ99608 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDNQ99608 AP002469.2-201ENST00000531724 424 ntBASIC16.58■□□□□ 0.24
NDNQ99608 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC16.58■□□□□ 0.24
NDNQ99608 AC087641.1-201ENST00000557561 1021 ntBASIC16.58■□□□□ 0.24
NDNQ99608 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NDNQ99608 MIR7706-201ENST00000613747 67 ntBASIC16.58■□□□□ 0.24
NDNQ99608 AC129492.6-201ENST00000611383 1305 ntBASIC16.58■□□□□ 0.24
NDNQ99608 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC16.58■□□□□ 0.24
NDNQ99608 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC16.58■□□□□ 0.24
NDNQ99608 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
NDNQ99608 GALE-216ENST00000617979 1566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDNQ99608 CDK2-204ENST00000553376 1725 ntTSL 5 BASIC16.58■□□□□ 0.24
NDNQ99608 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
NDNQ99608 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDNQ99608 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDNQ99608 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC16.58■□□□□ 0.24
NDNQ99608 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDNQ99608 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC16.58■□□□□ 0.24
NDNQ99608 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDNQ99608 CHTF18-202ENST00000317063 2988 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NDNQ99608 SCART1-206ENST00000640237 4351 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
NDNQ99608 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
NDNQ99608 ZDHHC24-201ENST00000310442 4721 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDNQ99608 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
NDNQ99608 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 CYB561D1-205ENST00000430195 5077 ntTSL 2 BASIC16.57■□□□□ 0.24
NDNQ99608 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.57■□□□□ 0.24
NDNQ99608 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.57■□□□□ 0.24
NDNQ99608 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC16.57■□□□□ 0.24
NDNQ99608 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC16.57■□□□□ 0.24
NDNQ99608 IQCF5-AS1-201ENST00000440723 2000 ntTSL 2 BASIC16.57■□□□□ 0.24
NDNQ99608 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 PANK2-209ENST00000621507 1763 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC16.57■□□□□ 0.24
NDNQ99608 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
NDNQ99608 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC16.57■□□□□ 0.24
NDNQ99608 PSMC3IP-202ENST00000393795 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 RPS2P28-201ENST00000314255 741 ntBASIC16.57■□□□□ 0.24
NDNQ99608 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.57■□□□□ 0.24
NDNQ99608 MRPL20P1-201ENST00000400819 433 ntBASIC16.57■□□□□ 0.24
NDNQ99608 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 CDK2AP2P3-201ENST00000422476 372 ntBASIC16.57■□□□□ 0.24
NDNQ99608 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC16.57■□□□□ 0.24
NDNQ99608 AC005412.3-201ENST00000580309 715 ntBASIC16.57■□□□□ 0.24
NDNQ99608 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC16.57■□□□□ 0.24
NDNQ99608 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NDNQ99608 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 TM9SF1-201ENST00000261789 2452 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
NDNQ99608 IL11-201ENST00000264563 2281 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC16.57■□□□□ 0.24
NDNQ99608 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
NDNQ99608 SERINC2-202ENST00000373710 2146 ntTSL 2 BASIC16.57■□□□□ 0.24
NDNQ99608 AC104640.1-201ENST00000562617 2109 ntBASIC16.57■□□□□ 0.24
NDNQ99608 AC004233.2-201ENST00000573315 2062 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
NDNQ99608 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC16.57■□□□□ 0.24
NDNQ99608 AL121845.3-201ENST00000490623 3119 ntTSL 5 BASIC16.56■□□□□ 0.24
NDNQ99608 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.56■□□□□ 0.24
NDNQ99608 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC16.56■□□□□ 0.24
NDNQ99608 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
NDNQ99608 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC16.56■□□□□ 0.24
NDNQ99608 CBSL-201ENST00000398168 2514 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC16.56■□□□□ 0.24
NDNQ99608 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.56■□□□□ 0.24
NDNQ99608 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC16.56■□□□□ 0.24
NDNQ99608 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.56■□□□□ 0.24
NDNQ99608 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC16.56■□□□□ 0.24
NDNQ99608 BAX-213ENST00000539787 458 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 AC104692.2-201ENST00000603054 253 ntBASIC16.56■□□□□ 0.24
NDNQ99608 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 TBC1D3D-201ENST00000616101 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 TBC1D3K-201ENST00000620247 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 PGM5P2-202ENST00000637225 1043 ntBASIC16.56■□□□□ 0.24
NDNQ99608 AL513523.2-202ENST00000427283 2040 ntBASIC16.56■□□□□ 0.24
NDNQ99608 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
NDNQ99608 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC16.56■□□□□ 0.24
NDNQ99608 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms