Protein–RNA interactions for Protein: Q99102

MUC4, Mucin-4, humanhuman

Predictions only

Length 2,169 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4Q99102 RGS3-206ENST00000374136 2092 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
MUC4Q99102 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
MUC4Q99102 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC12.07□□□□□ -0.48
MUC4Q99102 MEIS3-210ENST00000561096 1883 ntAPPRIS ALT2 TSL 2 BASIC12.07□□□□□ -0.48
MUC4Q99102 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC12.07□□□□□ -0.48
MUC4Q99102 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
MUC4Q99102 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC12.07□□□□□ -0.48
MUC4Q99102 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
MUC4Q99102 CCDC59-201ENST00000256151 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
MUC4Q99102 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 FABP5-202ENST00000396359 986 ntTSL 5 BASIC12.06□□□□□ -0.48
MUC4Q99102 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC12.06□□□□□ -0.48
MUC4Q99102 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC12.06□□□□□ -0.48
MUC4Q99102 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC12.06□□□□□ -0.48
MUC4Q99102 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC12.06□□□□□ -0.48
MUC4Q99102 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 AC107918.2-201ENST00000530817 355 ntBASIC12.06□□□□□ -0.48
MUC4Q99102 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC12.06□□□□□ -0.48
MUC4Q99102 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC12.06□□□□□ -0.48
MUC4Q99102 RPS29-206ENST00000557111 488 ntTSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 RIN3-211ENST00000557762 517 ntTSL 3 BASIC12.06□□□□□ -0.48
MUC4Q99102 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 CCDC116-203ENST00000607942 1913 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 REEP2-211ENST00000613650 1944 ntTSL 5 BASIC12.06□□□□□ -0.48
MUC4Q99102 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 PRAL-201ENST00000624952 3286 ntBASIC12.06□□□□□ -0.48
MUC4Q99102 AC073621.1-201ENST00000392730 636 ntBASIC12.06□□□□□ -0.48
MUC4Q99102 SLC9A3R1-202ENST00000413388 1285 ntTSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC12.06□□□□□ -0.48
MUC4Q99102 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 SEPT11-203ENST00000502584 2615 ntAPPRIS ALT1 TSL 5 BASIC12.06□□□□□ -0.48
MUC4Q99102 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 IGHV3-22-201ENST00000520721 359 ntBASIC12.06□□□□□ -0.48
MUC4Q99102 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 FAM238C-204ENST00000640224 1268 ntTSL 5 BASIC12.06□□□□□ -0.48
MUC4Q99102 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 AADAT-201ENST00000337664 2261 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 GNG2-213ENST00000556766 2125 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 GIMAP1-201ENST00000307194 4420 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
MUC4Q99102 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 SCNN1A-221ENST00000543768 2361 ntAPPRIS ALT2 TSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 SHISA5-209ENST00000443308 1933 ntTSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC12.06□□□□□ -0.48
MUC4Q99102 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
MUC4Q99102 GPAA1P2-202ENST00000606848 1787 ntBASIC12.06□□□□□ -0.48
MUC4Q99102 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
MUC4Q99102 CCDC110-201ENST00000307588 2898 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
MUC4Q99102 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
MUC4Q99102 HAUS3-204ENST00000506763 3166 ntTSL 2 BASIC12.05□□□□□ -0.48
MUC4Q99102 C19orf68-203ENST00000614654 3588 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
MUC4Q99102 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC12.05□□□□□ -0.48
MUC4Q99102 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
MUC4Q99102 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC12.05□□□□□ -0.48
MUC4Q99102 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC12.05□□□□□ -0.48
MUC4Q99102 URGCP-206ENST00000446958 365 ntTSL 2 BASIC12.05□□□□□ -0.48
MUC4Q99102 AC108073.2-201ENST00000464002 357 ntBASIC12.05□□□□□ -0.48
MUC4Q99102 PAEP-208ENST00000479141 990 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MUC4Q99102 SLC25A6P2-201ENST00000497974 877 ntBASIC12.05□□□□□ -0.48
MUC4Q99102 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
MUC4Q99102 MIR7706-201ENST00000613747 67 ntBASIC12.05□□□□□ -0.48
MUC4Q99102 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MUC4Q99102 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
MUC4Q99102 EGLN1-201ENST00000366641 7097 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MUC4Q99102 GRB7-205ENST00000445327 2197 ntTSL 2 BASIC12.05□□□□□ -0.48
MUC4Q99102 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
MUC4Q99102 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
MUC4Q99102 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
MUC4Q99102 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
MUC4Q99102 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
MUC4Q99102 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
MUC4Q99102 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC12.05□□□□□ -0.48
MUC4Q99102 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC12.05□□□□□ -0.48
MUC4Q99102 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 98,524 protein–RNA pairs in 56.7 ms