Protein–RNA interactions for Protein: Q96RY7

IFT140, Intraflagellar transport protein 140 homolog, humanhuman

Predictions only

Length 1,462 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFT140Q96RY7 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
IFT140Q96RY7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC26.65■■□□□ 1.86
IFT140Q96RY7 AL691432.1-201ENST00000596308 1422 ntBASIC26.65■■□□□ 1.86
IFT140Q96RY7 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC26.65■■□□□ 1.86
IFT140Q96RY7 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC26.65■■□□□ 1.86
IFT140Q96RY7 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC26.65■■□□□ 1.86
IFT140Q96RY7 OR5C1-201ENST00000373680 963 ntAPPRIS P1 BASIC26.65■■□□□ 1.86
IFT140Q96RY7 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
IFT140Q96RY7 CD8A-204ENST00000409781 597 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
IFT140Q96RY7 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
IFT140Q96RY7 DLGAP4-AS1-202ENST00000433238 593 ntTSL 3 BASIC26.65■■□□□ 1.86
IFT140Q96RY7 HOMER2P2-201ENST00000451621 847 ntBASIC26.65■■□□□ 1.86
IFT140Q96RY7 AC245100.5-201ENST00000452108 331 ntBASIC26.65■■□□□ 1.86
IFT140Q96RY7 AC026410.3-201ENST00000514280 936 ntBASIC26.65■■□□□ 1.86
IFT140Q96RY7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC26.65■■□□□ 1.86
IFT140Q96RY7 C1RL-212ENST00000545337 813 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
IFT140Q96RY7 SPAG5-AS1-203ENST00000554154 491 ntTSL 2 BASIC26.65■■□□□ 1.86
IFT140Q96RY7 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC26.65■■□□□ 1.86
IFT140Q96RY7 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
IFT140Q96RY7 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
IFT140Q96RY7 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC26.65■■□□□ 1.86
IFT140Q96RY7 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC26.65■■□□□ 1.86
IFT140Q96RY7 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC26.65■■□□□ 1.86
IFT140Q96RY7 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
IFT140Q96RY7 RNF38-204ENST00000357058 5254 ntAPPRIS P1 TSL 5 BASIC26.65■■□□□ 1.86
IFT140Q96RY7 LSMEM2-201ENST00000316436 1494 ntAPPRIS P1 TSL 1 (best) BASIC26.65■■□□□ 1.86
IFT140Q96RY7 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC26.64■■□□□ 1.86
IFT140Q96RY7 AL138709.1-201ENST00000614840 1693 ntBASIC26.64■■□□□ 1.86
IFT140Q96RY7 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
IFT140Q96RY7 ARL16-201ENST00000397498 1227 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
IFT140Q96RY7 RPL17P11-201ENST00000417593 544 ntBASIC26.64■■□□□ 1.86
IFT140Q96RY7 DUSP13-205ENST00000464872 684 ntTSL 3 BASIC26.64■■□□□ 1.86
IFT140Q96RY7 FHIT-208ENST00000492590 1081 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.86
IFT140Q96RY7 CCDC144NL-AS1-209ENST00000577860 884 ntTSL 5 BASIC26.64■■□□□ 1.86
IFT140Q96RY7 CYGB-203ENST00000589145 788 ntTSL 3 BASIC26.64■■□□□ 1.86
IFT140Q96RY7 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC26.64■■□□□ 1.86
IFT140Q96RY7 ARL16-214ENST00000621051 1181 ntTSL 1 (best) BASIC26.64■■□□□ 1.86
IFT140Q96RY7 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC26.64■■□□□ 1.86
IFT140Q96RY7 COMP-202ENST00000425807 2292 ntTSL 2 BASIC26.64■■□□□ 1.86
IFT140Q96RY7 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC26.64■■□□□ 1.86
IFT140Q96RY7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
IFT140Q96RY7 TEKT4-201ENST00000295201 1505 ntAPPRIS P1 TSL 1 (best) BASIC26.64■■□□□ 1.85
IFT140Q96RY7 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
IFT140Q96RY7 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC26.64■■□□□ 1.85
IFT140Q96RY7 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC26.64■■□□□ 1.85
IFT140Q96RY7 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
IFT140Q96RY7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC26.63■■□□□ 1.85
IFT140Q96RY7 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC26.63■■□□□ 1.85
IFT140Q96RY7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
IFT140Q96RY7 ISCA1-201ENST00000311534 813 ntTSL 2 BASIC26.63■■□□□ 1.85
IFT140Q96RY7 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC26.63■■□□□ 1.85
IFT140Q96RY7 KRTAP19-9P-201ENST00000421795 191 ntBASIC26.63■■□□□ 1.85
IFT140Q96RY7 HSPB1P2-201ENST00000448722 546 ntBASIC26.63■■□□□ 1.85
IFT140Q96RY7 LEF1-AS1-204ENST00000508266 559 ntTSL 4 BASIC26.63■■□□□ 1.85
IFT140Q96RY7 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC26.63■■□□□ 1.85
IFT140Q96RY7 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC26.63■■□□□ 1.85
IFT140Q96RY7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
IFT140Q96RY7 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC26.63■■□□□ 1.85
IFT140Q96RY7 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC26.63■■□□□ 1.85
IFT140Q96RY7 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 DUSP23-202ENST00000368108 694 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
IFT140Q96RY7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 NCBP2-203ENST00000422610 676 ntTSL 2 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 AC060234.1-201ENST00000422966 474 ntTSL 3 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 TMEM107-203ENST00000431792 455 ntTSL 3 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
IFT140Q96RY7 ARL2-204ENST00000529384 830 ntAPPRIS P1 TSL 3 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 SIRT2-219ENST00000613542 1170 ntTSL 5 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
IFT140Q96RY7 CCDC110-209ENST00000510617 2592 ntAPPRIS ALT2 TSL 5 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
IFT140Q96RY7 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 DDX55-203ENST00000421670 1574 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
IFT140Q96RY7 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
IFT140Q96RY7 BEX5-201ENST00000333643 857 ntAPPRIS P1 TSL 1 (best) BASIC26.62■■□□□ 1.85
IFT140Q96RY7 PRKG1-AS1-201ENST00000420193 971 ntTSL 3 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 AL590640.2-201ENST00000457038 527 ntBASIC26.62■■□□□ 1.85
IFT140Q96RY7 EIF3M-203ENST00000524896 1207 ntTSL 2 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC26.62■■□□□ 1.85
IFT140Q96RY7 AL451050.2-201ENST00000606967 682 ntBASIC26.62■■□□□ 1.85
IFT140Q96RY7 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC26.62■■□□□ 1.85
IFT140Q96RY7 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
IFT140Q96RY7 AL591845.1-201ENST00000373137 1838 ntTSL 2 BASIC26.61■■□□□ 1.85
IFT140Q96RY7 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC26.61■■□□□ 1.85
IFT140Q96RY7 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
IFT140Q96RY7 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
IFT140Q96RY7 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
IFT140Q96RY7 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
IFT140Q96RY7 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC26.61■■□□□ 1.85
IFT140Q96RY7 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC26.61■■□□□ 1.85
IFT140Q96RY7 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC26.61■■□□□ 1.85
IFT140Q96RY7 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC26.61■■□□□ 1.85
IFT140Q96RY7 AL355102.5-201ENST00000554769 572 ntTSL 4 BASIC26.61■■□□□ 1.85
IFT140Q96RY7 NIP7-208ENST00000569637 1099 ntTSL 2 BASIC26.61■■□□□ 1.85
IFT140Q96RY7 GEMIN7-204ENST00000591747 576 ntAPPRIS P1 TSL 5 BASIC26.61■■□□□ 1.85
Retrieved 100 of 98,524 protein–RNA pairs in 37.7 ms