Protein–RNA interactions for Protein: Q96PW8

CSPG4P5, Putative uncharacterized protein KIAA1920, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P5Q96PW8 LINC02199-201ENST00000506655 2702 ntBASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 TBL2-205ENST00000432538 1573 ntTSL 2 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 LINC01118-203ENST00000479311 1588 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 KRT76-201ENST00000332411 2529 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 AL355306.1-201ENST00000415580 579 ntBASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 AC004832.2-201ENST00000426397 482 ntBASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 RARRES2P8-201ENST00000566335 367 ntBASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 ZP3-204ENST00000416245 1846 ntTSL 2 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 PLAGL1-211ENST00000625622 3216 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 ZNF580-202ENST00000543039 1707 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 CCDC28A-202ENST00000611852 1505 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 HSFX1-201ENST00000370416 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 CDC14A-202ENST00000361544 2417 ntAPPRIS P4 TSL 1 (best) BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 PMS2P7-201ENST00000506558 1336 ntBASIC16.95■□□□□ 0.3
CSPG4P5Q96PW8 SLC8A2-201ENST00000236877 5234 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 SOWAHB-201ENST00000334306 3220 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 RAC2-201ENST00000249071 1482 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 CROCCP1-201ENST00000426910 5675 ntBASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 TPSAB1-202ENST00000461509 1357 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 GNAS-212ENST00000371098 1719 ntTSL 5 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 NEK7-201ENST00000367383 586 ntTSL 2 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 AC006042.2-201ENST00000428660 568 ntTSL 4 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 IGHV3OR16-6-201ENST00000568775 360 ntBASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 CDC42EP4-201ENST00000335793 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 SLFNL1-203ENST00000372611 1865 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 CYP4B1-203ENST00000371923 2110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 NARF-206ENST00000457415 1668 ntTSL 5 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 AL138694.1-201ENST00000637731 1689 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 ALDH2-202ENST00000416293 1572 ntTSL 2 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 INTS14-209ENST00000567744 2419 ntTSL 2 BASIC16.94■□□□□ 0.3
CSPG4P5Q96PW8 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 DENND3-201ENST00000262585 5438 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 SEC14L4-201ENST00000255858 2499 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 SLC6A8-204ENST00000430077 1892 ntTSL 2 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 KRT73-201ENST00000305748 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 SHISA5-208ENST00000442747 2250 ntTSL 2 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 ZSCAN18-208ENST00000595944 1768 ntTSL 2 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 PRYP6-201ENST00000514804 343 ntBASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 OTUB2-202ENST00000553723 708 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.93■□□□□ 0.3
CSPG4P5Q96PW8 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31 ms