Protein–RNA interactions for Protein: Q96P16

RPRD1A, Regulation of nuclear pre-mRNA domain-containing protein 1A, humanhuman

Predicted RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1AQ96P16 ALOX12P2-203ENST00000570921 1945 ntBASIC16.96■□□□□ 0.3
RPRD1AQ96P16 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC16.96■□□□□ 0.3
RPRD1AQ96P16 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.3
RPRD1AQ96P16 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 SART1-201ENST00000312397 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 TOM1-210ENST00000449058 2389 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 BLOC1S2-202ENST00000370372 1249 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 ADGRB2-203ENST00000398538 4675 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AC142381.1-201ENST00000426099 345 ntBASIC16.95■□□□□ 0.3
RPRD1AQ96P16 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 RBPMS2P1-201ENST00000437762 623 ntBASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AGGF1-204ENST00000506806 1142 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 SSH2-211ENST00000590153 570 ntTSL 4 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AC254562.3-201ENST00000626627 631 ntTSL 5 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 LINC00628-201ENST00000628516 1289 ntBASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AC084121.4-201ENST00000641598 221 ntBASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AF228730.8-201ENST00000642140 221 ntBASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AGTPBP1-201ENST00000337006 4473 ntTSL 5 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 PCM1-206ENST00000518537 2171 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 TTLL11-201ENST00000321582 3250 ntAPPRIS P1 TSL 5 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 SHTN1-202ENST00000355371 5361 ntAPPRIS ALT1 TSL 2 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 AC009292.1-201ENST00000502156 1986 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 PSEN2-211ENST00000626989 1972 ntTSL 5 BASIC16.95■□□□□ 0.3
RPRD1AQ96P16 GSKIP-205ENST00000555181 2218 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 AC005052.1-201ENST00000625181 2492 ntBASIC16.94■□□□□ 0.3
RPRD1AQ96P16 TSC22D1-AS1-201ENST00000616360 2845 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 PCDHA14-201ENST00000506751 2298 ntBASIC16.94■□□□□ 0.3
RPRD1AQ96P16 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 PPP4R3A-208ENST00000555462 3236 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 AL139400.1-201ENST00000366220 510 ntBASIC16.94■□□□□ 0.3
RPRD1AQ96P16 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 AC093724.1-201ENST00000448659 1027 ntBASIC16.94■□□□□ 0.3
RPRD1AQ96P16 MLF1-210ENST00000484955 1247 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 AC004449.1-201ENST00000564240 433 ntBASIC16.94■□□□□ 0.3
RPRD1AQ96P16 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 TRIM29-221ENST00000627238 510 ntTSL 5 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 FADS3-207ENST00000527697 1640 ntTSL 5 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 KRT12-201ENST00000251643 1867 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 PAPLN-202ENST00000340738 5834 ntAPPRIS P2 TSL 5 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 RAB31-207ENST00000578921 4055 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 ATXN2-201ENST00000377617 4702 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
RPRD1AQ96P16 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 SAMM50-201ENST00000350028 1717 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
RPRD1AQ96P16 PYCR1-201ENST00000329875 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms