Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 IFT20-203ENST00000395418 825 ntAPPRIS P4 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 GIMAP3P-201ENST00000495150 836 ntBASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 MRNIP-212ENST00000520698 902 ntAPPRIS ALT2 TSL 2 BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 AC040162.1-202ENST00000573493 573 ntAPPRIS P1 TSL 3 BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 LINC01775-201ENST00000587826 371 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 IFT20-216ENST00000588477 774 ntTSL 5 BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 SPIN2A-203ENST00000614076 966 ntTSL 3 BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 AC004840.1-201ENST00000636359 365 ntBASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 BCL2L12-203ENST00000441864 1371 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 AP005329.2-201ENST00000580139 1771 ntTSL 2 BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
SLC46A1Q96NT5 SNRPN-201ENST00000346403 1304 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 ARFGAP1-220ENST00000547204 1327 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 PNCK-202ENST00000370142 1525 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 AC080080.1-201ENST00000625121 2420 ntBASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 LTB4R2-202ENST00000528054 3092 ntBASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 CCNA1-203ENST00000625767 1699 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 BTBD7P1-201ENST00000447253 1453 ntBASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 AL391825.1-201ENST00000457671 1364 ntBASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 NAA10-201ENST00000370009 837 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 NAA10-203ENST00000370015 1002 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 MRNIP-202ENST00000376931 1004 ntAPPRIS ALT2 TSL 2 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 RAB30-AS1-202ENST00000526795 567 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 AC013467.2-201ENST00000605472 835 ntBASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 SGO1-201ENST00000263753 2338 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 AC005915.1-201ENST00000624912 2018 ntBASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 ESR2-206ENST00000553796 1634 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 HFE2-205ENST00000497365 1419 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 MFSD2A-201ENST00000372809 2173 ntTSL 2 BASIC15.68■□□□□ 0.1
SLC46A1Q96NT5 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 ACTA1-201ENST00000366683 1122 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 NDUFA3-204ENST00000391764 267 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 FBLN7-204ENST00000409667 1124 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 AC087499.6-201ENST00000411576 835 ntBASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 DFFBP1-201ENST00000433250 979 ntBASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 AC078942.1-201ENST00000448698 589 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 GS1-24F4.2-201ENST00000500823 1110 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 AC098859.1-201ENST00000502915 1238 ntBASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 FAM86HP-203ENST00000511564 521 ntTSL 2 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 ZNF890P-202ENST00000530367 1156 ntBASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 AC135586.1-201ENST00000539323 574 ntBASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 MAX-210ENST00000555419 765 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 AC105021.1-202ENST00000570572 669 ntBASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 AL031056.2-201ENST00000637957 1217 ntTSL 5 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 EYA2-201ENST00000317304 1540 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
SLC46A1Q96NT5 IFFO1-211ENST00000615885 2775 ntTSL 5 BASIC15.67■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms