Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 AC190387.1-201ENST00000551683 408 ntBASIC13.41□□□□□ -0.26
ZNF48Q96MX3 PRR29-209ENST00000582540 967 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
ZNF48Q96MX3 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 TUBB8P12-201ENST00000308911 1335 ntBASIC13.4□□□□□ -0.26
ZNF48Q96MX3 TUBB7P-202ENST00000428444 1305 ntBASIC13.4□□□□□ -0.26
ZNF48Q96MX3 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 TUBB8P7-204ENST00000567960 1332 ntBASIC13.4□□□□□ -0.26
ZNF48Q96MX3 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 ADGRG3-202ENST00000450388 1785 ntAPPRIS ALT2 TSL 2 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 NPM2-203ENST00000397940 1874 ntAPPRIS P2 TSL 2 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 AC106886.4-201ENST00000623557 2502 ntBASIC13.4□□□□□ -0.26
ZNF48Q96MX3 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 LINC00266-1-201ENST00000279067 928 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 LCE1E-201ENST00000368770 1180 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 COLEC11-205ENST00000402922 1134 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 STARD13-205ENST00000439831 945 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 TERF1P3-201ENST00000505638 1227 ntBASIC13.4□□□□□ -0.26
ZNF48Q96MX3 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 YTHDF3-AS1-201ENST00000603538 718 ntBASIC13.4□□□□□ -0.26
ZNF48Q96MX3 AF228730.6-201ENST00000641497 218 ntBASIC13.4□□□□□ -0.26
ZNF48Q96MX3 AC084121.3-201ENST00000641716 218 ntBASIC13.4□□□□□ -0.26
ZNF48Q96MX3 AC105233.6-201ENST00000642093 218 ntBASIC13.4□□□□□ -0.26
ZNF48Q96MX3 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 MARVELD3-204ENST00000565261 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 PNMA6E-202ENST00000633844 2596 ntTSL 3 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 SLC25A45-208ENST00000527174 2138 ntAPPRIS P1 TSL 3 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 AL162727.3-201ENST00000635661 2787 ntBASIC13.4□□□□□ -0.26
ZNF48Q96MX3 EXD3-203ENST00000465160 1585 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 FOXA1-201ENST00000250448 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 SSR4-201ENST00000320857 1671 ntAPPRIS P1 TSL 2 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.4□□□□□ -0.26
ZNF48Q96MX3 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC13.4□□□□□ -0.27
ZNF48Q96MX3 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 DXO-203ENST00000375356 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 AC068831.1-204ENST00000501381 1621 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 GBGT1-201ENST00000372036 871 ntTSL 3 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 TRAPPC3-203ENST00000373163 951 ntTSL 3 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC13.39□□□□□ -0.27
ZNF48Q96MX3 WBP2-203ENST00000433525 928 ntTSL 2 BASIC13.39□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms