Protein–RNA interactions for Protein: Q96LD4

TRIM47, Tripartite motif-containing protein 47, humanhuman

Predictions only

Length 638 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47Q96LD4 AL132655.2-201ENST00000596276 594 ntBASIC19.22■□□□□ 0.67
TRIM47Q96LD4 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 AC008738.7-201ENST00000609744 511 ntBASIC19.22■□□□□ 0.67
TRIM47Q96LD4 WT1-AS_2.1-201ENST00000613208 137 ntBASIC19.22■□□□□ 0.67
TRIM47Q96LD4 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 HCRTR1-203ENST00000403528 2003 ntAPPRIS P1 TSL 5 BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 AC007541.1-201ENST00000570282 1469 ntBASIC19.22■□□□□ 0.67
TRIM47Q96LD4 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 DPY19L3-206ENST00000587077 2456 ntTSL 1 (best) BASIC19.22■□□□□ 0.67
TRIM47Q96LD4 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 UBB-201ENST00000302182 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 PAM16-201ENST00000318059 587 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 LEPROTL1-202ENST00000442880 908 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 AC015688.8-201ENST00000577746 656 ntTSL 4 BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 GPER1-207ENST00000619052 571 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 LSP1-203ENST00000405957 1785 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 ALMS1P1-202ENST00000450720 1601 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 ANKRD2-203ENST00000370655 1451 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 SPSB2-203ENST00000519357 1496 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 LINC02268-202ENST00000515444 1328 ntTSL 2 BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
TRIM47Q96LD4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC19.21■□□□□ 0.66
TRIM47Q96LD4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
TRIM47Q96LD4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 LILRA6-201ENST00000245621 1395 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 SELENBP1-201ENST00000368868 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 YBEY-202ENST00000339195 890 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 YBEY-203ENST00000397691 764 ntAPPRIS P1 TSL 3 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 LRP5L-201ENST00000402785 1193 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 GIMAP3P-201ENST00000495150 836 ntBASIC19.2■□□□□ 0.66
TRIM47Q96LD4 STOM-203ENST00000538954 1257 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 EMC4-203ENST00000557879 1009 ntTSL 3 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 IGHV3-72-202ENST00000621503 303 ntBASIC19.2■□□□□ 0.66
TRIM47Q96LD4 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
TRIM47Q96LD4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 PGC-202ENST00000373025 1371 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 OCIAD1-202ENST00000381473 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 C1QA-201ENST00000374642 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 RTN4RL2-202ENST00000395120 582 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 PSMB5-204ENST00000460922 729 ntTSL 2 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 ZFPL1-207ENST00000526791 384 ntTSL 3 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 AC140912.1-201ENST00000577171 1054 ntBASIC19.19■□□□□ 0.66
TRIM47Q96LD4 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
TRIM47Q96LD4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms