Protein–RNA interactions for Protein: Q969V3

NCLN, Nicalin, humanhuman

Predictions only

Length 563 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCLNQ969V3 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
NCLNQ969V3 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC16.07■□□□□ 0.16
NCLNQ969V3 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC16.07■□□□□ 0.16
NCLNQ969V3 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.07■□□□□ 0.16
NCLNQ969V3 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 TMC4-209ENST00000617472 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 CUX1-211ENST00000546411 4212 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
NCLNQ969V3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NCLNQ969V3 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.07■□□□□ 0.16
NCLNQ969V3 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC16.07■□□□□ 0.16
NCLNQ969V3 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC16.07■□□□□ 0.16
NCLNQ969V3 RPL13AP23-201ENST00000480739 586 ntBASIC16.07■□□□□ 0.16
NCLNQ969V3 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.07■□□□□ 0.16
NCLNQ969V3 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 PGM5P2-202ENST00000637225 1043 ntBASIC16.07■□□□□ 0.16
NCLNQ969V3 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.07■□□□□ 0.16
NCLNQ969V3 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 AC021683.3-202ENST00000592572 4440 ntTSL 5 BASIC16.07■□□□□ 0.16
NCLNQ969V3 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 AL132857.2-201ENST00000634305 1737 ntTSL 5 BASIC16.07■□□□□ 0.16
NCLNQ969V3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC16.07■□□□□ 0.16
NCLNQ969V3 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC16.07■□□□□ 0.16
NCLNQ969V3 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NCLNQ969V3 ICA1L-201ENST00000358299 3457 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
NCLNQ969V3 MYB-201ENST00000316528 3571 ntTSL 5 BASIC16.07■□□□□ 0.16
NCLNQ969V3 MYB-241ENST00000616088 3573 ntTSL 5 BASIC16.07■□□□□ 0.16
NCLNQ969V3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 ADAMTS15-201ENST00000299164 5673 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCLNQ969V3 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC16.06■□□□□ 0.16
NCLNQ969V3 BCL2L11-219ENST00000619294 5132 ntTSL 5 BASIC16.06■□□□□ 0.16
NCLNQ969V3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC16.06■□□□□ 0.16
NCLNQ969V3 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
NCLNQ969V3 DACH1-203ENST00000619232 2986 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NCLNQ969V3 PAUPAR-201ENST00000630360 2965 ntBASIC16.06■□□□□ 0.16
NCLNQ969V3 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCLNQ969V3 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC16.06■□□□□ 0.16
NCLNQ969V3 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCLNQ969V3 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCLNQ969V3 GPBAR1-201ENST00000479077 1869 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NCLNQ969V3 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC16.06■□□□□ 0.16
NCLNQ969V3 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCLNQ969V3 COPS8-202ENST00000392008 1654 ntTSL 2 BASIC16.06■□□□□ 0.16
NCLNQ969V3 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCLNQ969V3 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCLNQ969V3 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC16.06■□□□□ 0.16
NCLNQ969V3 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
NCLNQ969V3 LMCD1-204ENST00000426878 1431 ntTSL 2 BASIC16.06■□□□□ 0.16
NCLNQ969V3 CHRNG-201ENST00000389492 1398 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCLNQ969V3 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.06■□□□□ 0.16
NCLNQ969V3 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NCLNQ969V3 AP4S1-202ENST00000313566 839 ntTSL 3 BASIC16.06■□□□□ 0.16
NCLNQ969V3 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC16.06■□□□□ 0.16
NCLNQ969V3 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC16.06■□□□□ 0.16
NCLNQ969V3 RNA5SP415-201ENST00000517246 115 ntBASIC16.06■□□□□ 0.16
NCLNQ969V3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCLNQ969V3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC16.06■□□□□ 0.16
NCLNQ969V3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC16.06■□□□□ 0.16
NCLNQ969V3 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.06■□□□□ 0.16
NCLNQ969V3 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.06■□□□□ 0.16
NCLNQ969V3 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC16.06■□□□□ 0.16
NCLNQ969V3 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.06■□□□□ 0.16
NCLNQ969V3 AF228730.7-201ENST00000641842 219 ntBASIC16.06■□□□□ 0.16
NCLNQ969V3 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NCLNQ969V3 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCLNQ969V3 ELFN2-207ENST00000613079 8360 ntAPPRIS P1 TSL 4 BASIC16.06■□□□□ 0.16
NCLNQ969V3 ARHGAP27-208ENST00000528384 2296 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCLNQ969V3 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
NCLNQ969V3 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NCLNQ969V3 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 PPL-201ENST00000345988 6238 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NCLNQ969V3 AFF4-201ENST00000265343 9552 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 CTXND1-201ENST00000560778 6890 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
NCLNQ969V3 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC16.05■□□□□ 0.16
NCLNQ969V3 MINDY1-201ENST00000312210 2400 ntTSL 2 BASIC16.05■□□□□ 0.16
NCLNQ969V3 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC16.05■□□□□ 0.16
NCLNQ969V3 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC16.05■□□□□ 0.16
NCLNQ969V3 CYP46A1-201ENST00000261835 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 PXK-204ENST00000383716 3035 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 AL645728.1-201ENST00000366221 2101 ntBASIC16.05■□□□□ 0.16
NCLNQ969V3 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCLNQ969V3 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms