Protein–RNA interactions for Protein: Q969E2

SCAMP4, Secretory carrier-associated membrane protein 4, humanhuman

Predictions only

Length 229 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4Q969E2 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 MRS2-202ENST00000378353 1740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 CD81-202ENST00000381036 880 ntTSL 3 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 HNRNPFP1-201ENST00000391730 1133 ntBASIC16.32■□□□□ 0.2
SCAMP4Q969E2 RPL30-202ENST00000396070 440 ntTSL 2 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 ME2P1-201ENST00000426028 1970 ntBASIC16.32■□□□□ 0.2
SCAMP4Q969E2 TMEM91-205ENST00000436170 864 ntTSL 5 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 AC108047.1-201ENST00000457407 404 ntTSL 2 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 ALG1L8P-201ENST00000533887 760 ntBASIC16.32■□□□□ 0.2
SCAMP4Q969E2 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 SPTSSB-204ENST00000617024 1292 ntBASIC16.32■□□□□ 0.2
SCAMP4Q969E2 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SCAMP4Q969E2 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 SCP2-213ENST00000528311 1896 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 TMEM51-202ENST00000376014 1843 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 CALCR-207ENST00000426151 1741 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 MIB2-217ENST00000504599 3311 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 AP3S2-216ENST00000617003 1561 ntBASIC16.31■□□□□ 0.2
SCAMP4Q969E2 RAB11FIP5-205ENST00000486777 6120 ntTSL 5 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 JAG1-201ENST00000254958 6048 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 SIGLEC7-201ENST00000305628 1469 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 AP1AR-201ENST00000274000 2902 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 PLXDC2-202ENST00000377242 2822 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 AC092364.2-201ENST00000596710 2692 ntBASIC16.31■□□□□ 0.2
SCAMP4Q969E2 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 SLC9A7-201ENST00000328306 3838 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 PI16-201ENST00000373674 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 ORMDL3-201ENST00000304046 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 ACE-204ENST00000428043 5120 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 ITGB4-201ENST00000200181 5919 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 MAGEA2-207ENST00000620710 1947 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 AC099398.1-201ENST00000567919 2776 ntBASIC16.31■□□□□ 0.2
SCAMP4Q969E2 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SCAMP4Q969E2 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 PCDH8P1-201ENST00000428983 2773 ntBASIC16.3■□□□□ 0.2
SCAMP4Q969E2 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 SNAI2-201ENST00000020945 2010 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 MIPEPP3-202ENST00000424756 347 ntTSL 3 BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 SLBP-205ENST00000488267 987 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 AC098859.1-201ENST00000502915 1238 ntBASIC16.3■□□□□ 0.2
SCAMP4Q969E2 AC025678.2-201ENST00000562061 970 ntBASIC16.3■□□□□ 0.2
SCAMP4Q969E2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.3■□□□□ 0.2
SCAMP4Q969E2 AP001059.3-201ENST00000619053 235 ntBASIC16.3■□□□□ 0.2
SCAMP4Q969E2 Z92544.3-201ENST00000624747 417 ntBASIC16.3■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms