Protein–RNA interactions for Protein: Q92834

RPGR, X-linked retinitis pigmentosa GTPase regulator, humanhuman

Known RBP Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRQ92834 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC20.13■□□□□ 0.81
RPGRQ92834 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPGRQ92834 TMEM150A-203ENST00000409668 1776 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RPGRQ92834 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
RPGRQ92834 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPGRQ92834 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RPGRQ92834 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
RPGRQ92834 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RPGRQ92834 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPGRQ92834 NBL1-213ENST00000622566 2109 ntAPPRIS P3 TSL 4 BASIC20.12■□□□□ 0.81
RPGRQ92834 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPGRQ92834 ZDHHC4-203ENST00000396707 1461 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPGRQ92834 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.12■□□□□ 0.81
RPGRQ92834 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPGRQ92834 KIAA0895-208ENST00000440378 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPGRQ92834 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RPGRQ92834 TBC1D10A-203ENST00000403362 1833 ntAPPRIS ALT2 TSL 5 BASIC20.12■□□□□ 0.81
RPGRQ92834 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPGRQ92834 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RPGRQ92834 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC20.12■□□□□ 0.81
RPGRQ92834 TMEM14DP-201ENST00000422205 345 ntBASIC20.12■□□□□ 0.81
RPGRQ92834 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC20.12■□□□□ 0.81
RPGRQ92834 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC20.12■□□□□ 0.81
RPGRQ92834 C9orf41-AS1-201ENST00000455609 719 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPGRQ92834 TIMM17BP1-201ENST00000545713 516 ntBASIC20.12■□□□□ 0.81
RPGRQ92834 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC20.12■□□□□ 0.81
RPGRQ92834 AC074044.1-201ENST00000609673 707 ntBASIC20.12■□□□□ 0.81
RPGRQ92834 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RPGRQ92834 RELA-227ENST00000615805 2236 ntTSL 5 BASIC20.12■□□□□ 0.81
RPGRQ92834 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC20.12■□□□□ 0.81
RPGRQ92834 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPGRQ92834 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPGRQ92834 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
RPGRQ92834 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RPGRQ92834 NOC2LP2-201ENST00000407594 1944 ntBASIC20.12■□□□□ 0.81
RPGRQ92834 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPGRQ92834 ACSF2-201ENST00000300441 2235 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPGRQ92834 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RPGRQ92834 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC20.11■□□□□ 0.81
RPGRQ92834 PGAP3-203ENST00000378011 2533 ntTSL 2 BASIC20.11■□□□□ 0.81
RPGRQ92834 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPGRQ92834 TRIM46-209ENST00000543729 1703 ntTSL 5 BASIC20.11■□□□□ 0.81
RPGRQ92834 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPGRQ92834 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPGRQ92834 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC20.11■□□□□ 0.81
RPGRQ92834 LINC01784-201ENST00000438401 378 ntTSL 2 BASIC20.11■□□□□ 0.81
RPGRQ92834 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC20.11■□□□□ 0.81
RPGRQ92834 AC007389.4-201ENST00000454674 793 ntBASIC20.11■□□□□ 0.81
RPGRQ92834 AC092337.1-201ENST00000568699 1129 ntBASIC20.11■□□□□ 0.81
RPGRQ92834 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPGRQ92834 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC20.11■□□□□ 0.81
RPGRQ92834 AL512343.1-201ENST00000605837 169 ntBASIC20.11■□□□□ 0.81
RPGRQ92834 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC20.11■□□□□ 0.81
RPGRQ92834 BX276092.9-201ENST00000636797 1563 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RPGRQ92834 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPGRQ92834 MUM1-216ENST00000627377 2235 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RPGRQ92834 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPGRQ92834 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RPGRQ92834 EIPR1-202ENST00000398659 1795 ntTSL 5 BASIC20.11■□□□□ 0.81
RPGRQ92834 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RPGRQ92834 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.1■□□□□ 0.81
RPGRQ92834 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 HARS2-206ENST00000508522 1562 ntTSL 2 BASIC20.1■□□□□ 0.81
RPGRQ92834 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RPGRQ92834 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC20.1■□□□□ 0.81
RPGRQ92834 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 AC234783.1-201ENST00000441761 496 ntBASIC20.1■□□□□ 0.81
RPGRQ92834 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC20.1■□□□□ 0.81
RPGRQ92834 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC20.1■□□□□ 0.81
RPGRQ92834 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC20.1■□□□□ 0.81
RPGRQ92834 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RPGRQ92834 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC20.1■□□□□ 0.81
RPGRQ92834 AC087612.1-201ENST00000560238 658 ntTSL 5 BASIC20.1■□□□□ 0.81
RPGRQ92834 AC009088.3-201ENST00000563605 357 ntTSL 3 BASIC20.1■□□□□ 0.81
RPGRQ92834 RRP7BP-205ENST00000566851 833 ntBASIC20.1■□□□□ 0.81
RPGRQ92834 WFDC1-204ENST00000613603 549 ntBASIC20.1■□□□□ 0.81
RPGRQ92834 NOP16-209ENST00000618911 1087 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 CYB5R3-204ENST00000407332 1849 ntTSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 TMTC4-203ENST00000376234 3483 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 CYB561D2-202ENST00000418577 1533 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RPGRQ92834 MAGEA8-201ENST00000286482 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 FDPS-201ENST00000356657 1478 ntAPPRIS P3 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC20.1■□□□□ 0.81
RPGRQ92834 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RPGRQ92834 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC20.1■□□□□ 0.81
RPGRQ92834 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC20.1■□□□□ 0.81
RPGRQ92834 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC20.1■□□□□ 0.81
RPGRQ92834 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRQ92834 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC20.09■□□□□ 0.81
RPGRQ92834 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC20.09■□□□□ 0.81
RPGRQ92834 COMMD6-203ENST00000377615 1793 ntAPPRIS P1 TSL 5 BASIC20.09■□□□□ 0.81
RPGRQ92834 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC20.09■□□□□ 0.81
RPGRQ92834 RBFOX3-212ENST00000584778 1547 ntAPPRIS ALT2 TSL 5 BASIC20.09■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms