Protein–RNA interactions for Protein: Q8WWK9

CKAP2, Cytoskeleton-associated protein 2, humanhuman

Predictions only

Length 683 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2Q8WWK9 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 PCBP1-201ENST00000303577 1750 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 TAF6-209ENST00000452041 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 SNX18-202ENST00000343017 3140 ntBASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 GSN-203ENST00000373808 2664 ntTSL 2 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 TUBGCP2-204ENST00000417178 4029 ntTSL 2 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 AL592424.1-201ENST00000563624 1536 ntBASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.4■□□□□ 0.22
CKAP2Q8WWK9 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
CKAP2Q8WWK9 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC16.39■□□□□ 0.22
CKAP2Q8WWK9 BSCL2-201ENST00000278893 1364 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 SLC8B1-201ENST00000202831 2975 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 PLXND1-201ENST00000324093 7094 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 SIGLEC16-201ENST00000599858 1437 ntBASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 PLPPR4-203ENST00000457765 4846 ntTSL 2 BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 CPT2-201ENST00000371486 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 TSPY5P-201ENST00000426936 936 ntBASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 AL353135.1-201ENST00000606729 504 ntBASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 BLMH-201ENST00000261714 2365 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 P3H1-201ENST00000236040 2993 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 MECR-202ENST00000373791 2416 ntTSL 2 BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 BCAR1-207ENST00000538440 3192 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 NFIC-211ENST00000641145 8399 ntBASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 RNF32-204ENST00000392743 1746 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
CKAP2Q8WWK9 AQP8-201ENST00000219660 1359 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 SERTAD4-201ENST00000367012 5219 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 NEO1-207ENST00000560262 4315 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 CDC42-203ENST00000400259 2274 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 MMP2-201ENST00000219070 3741 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 AC106881.1-201ENST00000605849 3329 ntBASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 C21orf33-201ENST00000291577 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 PCDHB8-201ENST00000239444 2740 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 ATP4B-201ENST00000335288 1488 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 KIAA1191-201ENST00000298569 2991 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 COPE-211ENST00000600932 1144 ntTSL 5 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 CRAMP1-202ENST00000397412 7772 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 EPHX2-209ENST00000521780 2038 ntTSL 2 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
CKAP2Q8WWK9 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.37■□□□□ 0.21
CKAP2Q8WWK9 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.37■□□□□ 0.21
CKAP2Q8WWK9 PPA2-201ENST00000341695 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKAP2Q8WWK9 RASSF1-205ENST00000395126 1657 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CKAP2Q8WWK9 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKAP2Q8WWK9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKAP2Q8WWK9 AP003680.1-201ENST00000598970 3660 ntBASIC16.37■□□□□ 0.21
CKAP2Q8WWK9 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKAP2Q8WWK9 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
CKAP2Q8WWK9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC16.37■□□□□ 0.21
CKAP2Q8WWK9 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
CKAP2Q8WWK9 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
CKAP2Q8WWK9 PSMB8-202ENST00000374882 1124 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.6 ms