Protein–RNA interactions for Protein: Q8TBC4

UBA3, NEDD8-activating enzyme E1 catalytic subunit, humanhuman

Predictions only

Length 463 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3Q8TBC4 CHTF18-220ENST00000631357 3555 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 FMNL3-202ENST00000352151 4006 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 EEFSEC-202ENST00000483457 1859 ntTSL 5 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 PKLR-202ENST00000392414 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 AP000787.1-201ENST00000501356 1926 ntTSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 AC092143.3-201ENST00000565150 1900 ntTSL 5 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 PHKG1-205ENST00000452681 2226 ntTSL 2 BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 INPP5J-207ENST00000405300 2515 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
UBA3Q8TBC4 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 TPM1-219ENST00000559397 1655 ntTSL 2 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 TAX1BP1-201ENST00000265393 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 TPD52L2-209ENST00000611972 2197 ntTSL 3 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 FAM46A-201ENST00000320172 5609 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 AL592309.1-201ENST00000443127 649 ntBASIC17.42■□□□□ 0.38
UBA3Q8TBC4 SEC24B-AS1-201ENST00000499359 957 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 SEC24B-AS1-204ENST00000510971 554 ntTSL 4 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 CCND1-203ENST00000536559 553 ntTSL 3 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 AC022145.2-201ENST00000598203 171 ntBASIC17.42■□□□□ 0.38
UBA3Q8TBC4 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 PLPPR5-202ENST00000370188 4139 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 WASHC2C-209ENST00000540872 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 TRIM39-205ENST00000396551 3249 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
UBA3Q8TBC4 AC006449.5-201ENST00000610658 2098 ntBASIC17.41■□□□□ 0.38
UBA3Q8TBC4 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 AC005329.1-201ENST00000501448 3571 ntTSL 2 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 NEIL2-204ENST00000455213 2323 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 C1QC-202ENST00000374639 1183 ntAPPRIS P1 TSL 2 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 AC004461.1-201ENST00000412461 403 ntBASIC17.41■□□□□ 0.38
UBA3Q8TBC4 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 RN7SL589P-201ENST00000481268 310 ntBASIC17.41■□□□□ 0.38
UBA3Q8TBC4 PRYP6-201ENST00000514804 343 ntBASIC17.41■□□□□ 0.38
UBA3Q8TBC4 LINC02055-207ENST00000524346 706 ntTSL 3 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 LINC01225-203ENST00000563550 1244 ntBASIC17.41■□□□□ 0.38
UBA3Q8TBC4 AC011476.2-201ENST00000585492 1271 ntTSL 2 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 FSTL3-207ENST00000605925 748 ntTSL 4 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 AL596442.2-201ENST00000610240 980 ntBASIC17.41■□□□□ 0.38
UBA3Q8TBC4 AL691403.2-201ENST00000618460 490 ntBASIC17.41■□□□□ 0.38
UBA3Q8TBC4 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 CEP19-202ENST00000409690 2201 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 HIST1H2AC-202ENST00000377791 1654 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 EPHA10-203ENST00000427468 3167 ntAPPRIS ALT2 TSL 5 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
UBA3Q8TBC4 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 DOK5-201ENST00000262593 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 NOX4-215ENST00000534731 2156 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 CCT2-202ENST00000543146 2189 ntTSL 2 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 TVP23B-201ENST00000307767 2064 ntAPPRIS P2 TSL 1 (best) BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 SH3YL1-206ENST00000405430 2064 ntAPPRIS P1 TSL 5 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 C20orf166-AS1-201ENST00000412495 2302 ntTSL 2 BASIC17.4■□□□□ 0.38
UBA3Q8TBC4 RNF151-201ENST00000321392 786 ntAPPRIS ALT2 TSL 1 (best) BASIC17.4■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 46.8 ms