Protein–RNA interactions for Protein: Q8TAU0

NKX2-3, Homeobox protein Nkx-2.3, humanhuman

Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3Q8TAU0 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 AL359764.1-201ENST00000444330 504 ntTSL 3 BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 PRYP6-201ENST00000514804 343 ntBASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 VCX-203ENST00000620630 812 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 UXT-AS1-201ENST00000590504 1525 ntBASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 CD40-207ENST00000620709 1522 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 NFE2-201ENST00000312156 1658 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 REXO1L8P-201ENST00000604378 1897 ntBASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 MBD1-210ENST00000457839 2473 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
NKX2-3Q8TAU0 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 CTSO-201ENST00000433477 2954 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 NOMO1-201ENST00000287667 4355 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 ABHD10-201ENST00000273359 2590 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 CCDC83-201ENST00000280245 2358 ntAPPRIS P3 TSL 2 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 AL031283.3-201ENST00000439788 727 ntTSL 3 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 ABHD18-203ENST00000444616 2129 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 MRPS22-212ENST00000495075 1547 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 ZNF606-202ENST00000546715 636 ntTSL 4 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 AC006449.5-201ENST00000610658 2098 ntBASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 MIR6799-201ENST00000620297 69 ntBASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 AC092811.2-201ENST00000632561 559 ntTSL 4 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NKX2-3Q8TAU0 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 GPS1-202ENST00000320548 1949 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 CT62-201ENST00000449977 1825 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 CU639417.3-201ENST00000624240 1404 ntBASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 TPM2-201ENST00000329305 1018 ntAPPRIS ALT1 TSL 2 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 SS18L2-202ENST00000447630 1047 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 RAB7A-204ENST00000483906 533 ntTSL 3 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 IGHV3-62-201ENST00000520057 340 ntBASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 CSAD-208ENST00000444623 2122 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 PRR5-218ENST00000624862 1900 ntTSL 5 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 RNPEPL1-201ENST00000270357 5658 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 FBXL12-206ENST00000588922 1843 ntTSL 2 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NKX2-3Q8TAU0 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-3Q8TAU0 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-3Q8TAU0 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
NKX2-3Q8TAU0 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-3Q8TAU0 TMEM101-201ENST00000206380 1536 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NKX2-3Q8TAU0 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 64.9 ms