Protein–RNA interactions for Protein: Q8NEP3

DNAAF1, Dynein assembly factor 1, axonemal, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNAAF1Q8NEP3 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 RBM17P3-201ENST00000417687 1192 ntBASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 KRT18P35-201ENST00000510488 1269 ntBASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 PNN-202ENST00000553331 656 ntTSL 3 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 AC087386.1-201ENST00000553658 572 ntTSL 4 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 TPM1-226ENST00000560959 925 ntTSL 2 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 IGHV3OR16-7-201ENST00000604106 360 ntBASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 AL139288.1-201ENST00000623748 933 ntBASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 TNFRSF14-AS1-201ENST00000416860 3522 ntTSL 2 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 GGT3P-204ENST00000453783 1664 ntBASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 TOR4A-201ENST00000357503 4148 ntAPPRIS P1 TSL 2 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 MANSC1-201ENST00000396349 2220 ntTSL 2 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 DYRK1B-205ENST00000597639 1806 ntTSL 5 BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 INPPL1-207ENST00000538751 4656 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 NCF1C-201ENST00000438382 1427 ntBASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 NIM1K-201ENST00000326035 2313 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
DNAAF1Q8NEP3 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 MBD4-203ENST00000429544 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 AC099063.4-201ENST00000641099 1602 ntBASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 PLEKHA4-202ENST00000355496 2614 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 SUCLA2-201ENST00000378654 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 MRPL57-201ENST00000309594 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 AC132008.2-207ENST00000454517 770 ntBASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 AC106771.1-201ENST00000502209 372 ntTSL 2 BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 AL022326.1-202ENST00000641533 845 ntBASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 FES-204ENST00000414248 2327 ntTSL 2 BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 AL590787.1-201ENST00000568856 1315 ntBASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 PRKD2-216ENST00000601806 2906 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 F3-202ENST00000370207 1879 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 COL26A1-201ENST00000313669 3033 ntAPPRIS P2 TSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 AC243591.1-201ENST00000452967 1364 ntBASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 KHDRBS1-202ENST00000327300 2757 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 NPAS2-201ENST00000335681 4007 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC14.56□□□□□ -0.08
DNAAF1Q8NEP3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 LATS2-201ENST00000382592 5511 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 AP002360.1-202ENST00000530460 2462 ntAPPRIS ALT2 BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 C17orf100-201ENST00000542475 1756 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 MARCO-201ENST00000327097 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 AC092198.1-201ENST00000447651 2691 ntTSL 2 BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 EMD-201ENST00000369835 966 ntTSL 3 BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.55□□□□□ -0.08
DNAAF1Q8NEP3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 52.9 ms