Protein–RNA interactions for Protein: Q8IY92

SLX4, Structure-specific endonuclease subunit SLX4, humanhuman

Predictions only

Length 1,834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLX4Q8IY92 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 LYSMD2-204ENST00000560491 1026 ntTSL 3 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 RAB38-201ENST00000243662 1465 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
SLX4Q8IY92 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
SLX4Q8IY92 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLX4Q8IY92 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLX4Q8IY92 GLMP-201ENST00000362007 1604 ntAPPRIS P3 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLX4Q8IY92 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC19.68■□□□□ 0.74
SLX4Q8IY92 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLX4Q8IY92 BSG-204ENST00000545507 1795 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLX4Q8IY92 GGT3P-204ENST00000453783 1664 ntBASIC19.68■□□□□ 0.74
SLX4Q8IY92 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLX4Q8IY92 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC19.68■□□□□ 0.74
SLX4Q8IY92 AC133919.2-202ENST00000563515 416 ntTSL 3 BASIC19.68■□□□□ 0.74
SLX4Q8IY92 SHBG-212ENST00000575314 1146 ntTSL 1 (best) BASIC19.68■□□□□ 0.74
SLX4Q8IY92 SCGB1C2-201ENST00000595228 478 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLX4Q8IY92 AC010328.2-201ENST00000597698 1111 ntBASIC19.68■□□□□ 0.74
SLX4Q8IY92 AC005523.1-201ENST00000598782 418 ntTSL 5 BASIC19.68■□□□□ 0.74
SLX4Q8IY92 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC19.68■□□□□ 0.74
SLX4Q8IY92 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC19.68■□□□□ 0.74
SLX4Q8IY92 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLX4Q8IY92 SLC17A3-202ENST00000360657 1750 ntTSL 2 BASIC19.68■□□□□ 0.74
SLX4Q8IY92 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC19.68■□□□□ 0.74
SLX4Q8IY92 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC19.68■□□□□ 0.74
SLX4Q8IY92 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC19.68■□□□□ 0.74
SLX4Q8IY92 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 TACR2-203ENST00000619173 1713 ntTSL 5 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 AC007731.4-201ENST00000420225 652 ntTSL 2 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 AC134915.1-201ENST00000426461 574 ntBASIC19.67■□□□□ 0.74
SLX4Q8IY92 AC093904.3-201ENST00000492300 368 ntTSL 2 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 AC005252.2-201ENST00000624630 1141 ntBASIC19.67■□□□□ 0.74
SLX4Q8IY92 RHOXF1P1-202ENST00000635473 501 ntBASIC19.67■□□□□ 0.74
SLX4Q8IY92 ABBA01031663.1-201ENST00000635630 790 ntBASIC19.67■□□□□ 0.74
SLX4Q8IY92 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 NFIX-214ENST00000592199 1509 ntTSL 5 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 PAX3-207ENST00000409551 1782 ntAPPRIS ALT1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 CCT7-216ENST00000540468 1674 ntTSL 2 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 EML3-217ENST00000531557 2509 ntTSL 5 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 PRSS54-204ENST00000567164 1799 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 SGSH-203ENST00000570923 1546 ntTSL 2 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 IRF3-223ENST00000599223 1055 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
SLX4Q8IY92 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
SLX4Q8IY92 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLX4Q8IY92 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLX4Q8IY92 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLX4Q8IY92 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 NTNG1-202ENST00000370065 1485 ntTSL 5 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 DUSP13-203ENST00000372702 1778 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLX4Q8IY92 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLX4Q8IY92 WRAP73-202ENST00000378322 1998 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
SLX4Q8IY92 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLX4Q8IY92 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLX4Q8IY92 BAATP1-201ENST00000412284 1225 ntBASIC19.66■□□□□ 0.74
SLX4Q8IY92 AL929472.3-201ENST00000433474 700 ntTSL 5 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 AL109811.2-201ENST00000447600 487 ntTSL 3 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 AC012568.1-201ENST00000558463 472 ntTSL 2 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 AC073263.1-201ENST00000616370 494 ntTSL 3 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 AL691432.1-201ENST00000596308 1422 ntBASIC19.66■□□□□ 0.74
SLX4Q8IY92 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLX4Q8IY92 PRR19-204ENST00000598490 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLX4Q8IY92 TUBB3-201ENST00000315491 1769 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLX4Q8IY92 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLX4Q8IY92 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC19.66■□□□□ 0.74
SLX4Q8IY92 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.66■□□□□ 0.74
SLX4Q8IY92 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
SLX4Q8IY92 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC19.65■□□□□ 0.74
SLX4Q8IY92 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC19.65■□□□□ 0.74
SLX4Q8IY92 AGER-203ENST00000375065 665 ntTSL 2 BASIC19.65■□□□□ 0.74
SLX4Q8IY92 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC19.65■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms