Protein–RNA interactions for Protein: Q8IW19

APLF, Aprataxin and PNK-like factor, humanhuman

Predicted RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APLFQ8IW19 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC16.43■□□□□ 0.22
APLFQ8IW19 TMPRSS3-204ENST00000433957 2403 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
APLFQ8IW19 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC16.42■□□□□ 0.22
APLFQ8IW19 MED29-202ENST00000594368 1471 ntTSL 2 BASIC16.42■□□□□ 0.22
APLFQ8IW19 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
APLFQ8IW19 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.42■□□□□ 0.22
APLFQ8IW19 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC16.42■□□□□ 0.22
APLFQ8IW19 SLC4A3-201ENST00000273063 4246 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC16.42■□□□□ 0.22
APLFQ8IW19 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 CACNA2D3-201ENST00000288197 3671 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 CACNA2D3-206ENST00000474759 3675 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
APLFQ8IW19 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 AC073621.1-201ENST00000392730 636 ntBASIC16.42■□□□□ 0.22
APLFQ8IW19 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC16.42■□□□□ 0.22
APLFQ8IW19 SLC4A1APP2-201ENST00000424054 1259 ntBASIC16.42■□□□□ 0.22
APLFQ8IW19 AC007967.2-201ENST00000432613 625 ntBASIC16.42■□□□□ 0.22
APLFQ8IW19 AC103564.2-201ENST00000432853 1299 ntBASIC16.42■□□□□ 0.22
APLFQ8IW19 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC16.42■□□□□ 0.22
APLFQ8IW19 ICAM2-205ENST00000578379 1064 ntTSL 5 BASIC16.42■□□□□ 0.22
APLFQ8IW19 ICAM2-206ENST00000578892 1056 ntTSL 3 BASIC16.42■□□□□ 0.22
APLFQ8IW19 LINC01451-201ENST00000623792 534 ntBASIC16.42■□□□□ 0.22
APLFQ8IW19 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
APLFQ8IW19 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC16.42■□□□□ 0.22
APLFQ8IW19 DCAF11-217ENST00000559115 2711 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 PTPN5-201ENST00000358540 3135 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC16.42■□□□□ 0.22
APLFQ8IW19 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
APLFQ8IW19 CRK-201ENST00000300574 3880 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
APLFQ8IW19 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC16.41■□□□□ 0.22
APLFQ8IW19 CHRD-201ENST00000204604 3521 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.41■□□□□ 0.22
APLFQ8IW19 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 RAB3IP-202ENST00000362025 2055 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 MTCL1-203ENST00000400050 6042 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
APLFQ8IW19 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.41■□□□□ 0.22
APLFQ8IW19 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 SMN1-201ENST00000351205 900 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
APLFQ8IW19 SMN2-201ENST00000380741 900 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
APLFQ8IW19 YWHAZ-203ENST00000395951 964 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 AC136632.2-201ENST00000512891 861 ntBASIC16.41■□□□□ 0.22
APLFQ8IW19 MRNIP-205ENST00000518235 1244 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 AL022328.4-201ENST00000608025 1001 ntTSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 LINC00623-201ENST00000613486 486 ntTSL 5 BASIC16.41■□□□□ 0.22
APLFQ8IW19 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
APLFQ8IW19 SMN2-216ENST00000638794 846 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
APLFQ8IW19 AC134684.3-201ENST00000641758 218 ntBASIC16.41■□□□□ 0.22
APLFQ8IW19 LY6E-207ENST00000520466 1419 ntAPPRIS P2 TSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
APLFQ8IW19 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 CELF4-202ENST00000361795 1853 ntAPPRIS ALT1 TSL 2 BASIC16.41■□□□□ 0.22
APLFQ8IW19 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
APLFQ8IW19 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
APLFQ8IW19 GLIPR2-205ENST00000619700 1645 ntTSL 3 BASIC16.41■□□□□ 0.22
APLFQ8IW19 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 ZC3H12A-201ENST00000373087 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
APLFQ8IW19 AC092171.3-201ENST00000610122 2651 ntBASIC16.41■□□□□ 0.22
APLFQ8IW19 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
APLFQ8IW19 ALPL-204ENST00000374840 2589 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
APLFQ8IW19 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 57.2 ms