Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 RHOF-201ENST00000267205 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP45Q70EL2 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
USP45Q70EL2 MSMO1-202ENST00000393766 1789 ntTSL 2 BASIC16.49■□□□□ 0.23
USP45Q70EL2 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC16.49■□□□□ 0.23
USP45Q70EL2 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
USP45Q70EL2 TEX30-202ENST00000376021 1038 ntTSL 2 BASIC16.49■□□□□ 0.23
USP45Q70EL2 SRPX-201ENST00000378533 1874 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP45Q70EL2 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
USP45Q70EL2 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC16.49■□□□□ 0.23
USP45Q70EL2 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.49■□□□□ 0.23
USP45Q70EL2 MCF2L-AS1-201ENST00000446789 712 ntTSL 3 BASIC16.49■□□□□ 0.23
USP45Q70EL2 ZNF655-216ENST00000449244 544 ntTSL 4 BASIC16.49■□□□□ 0.23
USP45Q70EL2 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP45Q70EL2 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC16.49■□□□□ 0.23
USP45Q70EL2 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP45Q70EL2 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC16.49■□□□□ 0.23
USP45Q70EL2 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
USP45Q70EL2 AC009133.1-203ENST00000569039 589 ntTSL 2 BASIC16.49■□□□□ 0.23
USP45Q70EL2 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC16.49■□□□□ 0.23
USP45Q70EL2 AC009093.7-201ENST00000623853 1223 ntBASIC16.49■□□□□ 0.23
USP45Q70EL2 AC084121.4-201ENST00000641598 221 ntBASIC16.49■□□□□ 0.23
USP45Q70EL2 AF228730.8-201ENST00000642140 221 ntBASIC16.49■□□□□ 0.23
USP45Q70EL2 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP45Q70EL2 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
USP45Q70EL2 CCDC40-201ENST00000269318 1970 ntTSL 2 BASIC16.49■□□□□ 0.23
USP45Q70EL2 DYNC1LI1-204ENST00000432458 1827 ntTSL 2 BASIC16.49■□□□□ 0.23
USP45Q70EL2 PYCR2-201ENST00000343818 1689 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP45Q70EL2 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP45Q70EL2 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.49■□□□□ 0.23
USP45Q70EL2 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
USP45Q70EL2 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
USP45Q70EL2 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
USP45Q70EL2 IL3RA-202ENST00000381469 1476 ntTSL 5 BASIC16.48■□□□□ 0.23
USP45Q70EL2 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC16.48■□□□□ 0.23
USP45Q70EL2 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC16.48■□□□□ 0.23
USP45Q70EL2 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
USP45Q70EL2 ELAC2-203ENST00000426905 2671 ntTSL 2 BASIC16.48■□□□□ 0.23
USP45Q70EL2 NEK2-202ENST00000366999 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC16.48■□□□□ 0.23
USP45Q70EL2 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 APOPT1-201ENST00000409074 2523 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 POLR2J4-203ENST00000326391 1422 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 SARDH-205ENST00000422262 2367 ntTSL 5 BASIC16.48■□□□□ 0.23
USP45Q70EL2 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC16.48■□□□□ 0.23
USP45Q70EL2 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 MIR346-201ENST00000362234 95 ntBASIC16.48■□□□□ 0.23
USP45Q70EL2 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 PP14571-201ENST00000404327 934 ntTSL 2 BASIC16.48■□□□□ 0.23
USP45Q70EL2 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC16.48■□□□□ 0.23
USP45Q70EL2 AC142381.1-201ENST00000426099 345 ntBASIC16.48■□□□□ 0.23
USP45Q70EL2 LINC01264-201ENST00000431395 500 ntTSL 3 BASIC16.48■□□□□ 0.23
USP45Q70EL2 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC16.48■□□□□ 0.23
USP45Q70EL2 AC119403.1-201ENST00000520090 776 ntTSL 5 BASIC16.48■□□□□ 0.23
USP45Q70EL2 SLC25A39P2-201ENST00000537614 270 ntBASIC16.48■□□□□ 0.23
USP45Q70EL2 AC093520.2-201ENST00000561830 333 ntBASIC16.48■□□□□ 0.23
USP45Q70EL2 AC013565.3-201ENST00000565547 450 ntTSL 3 BASIC16.48■□□□□ 0.23
USP45Q70EL2 AC006116.8-201ENST00000587004 987 ntTSL 2 BASIC16.48■□□□□ 0.23
USP45Q70EL2 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC16.48■□□□□ 0.23
USP45Q70EL2 WASHC2C-204ENST00000374362 4623 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.48■□□□□ 0.23
USP45Q70EL2 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
USP45Q70EL2 CLEC17A-202ENST00000417570 1399 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
USP45Q70EL2 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
USP45Q70EL2 AC005622.1-201ENST00000636801 1703 ntBASIC16.48■□□□□ 0.23
USP45Q70EL2 ME2P1-201ENST00000426028 1970 ntBASIC16.47■□□□□ 0.23
USP45Q70EL2 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.47■□□□□ 0.23
USP45Q70EL2 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.47■□□□□ 0.23
USP45Q70EL2 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC16.47■□□□□ 0.23
USP45Q70EL2 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP45Q70EL2 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.47■□□□□ 0.23
USP45Q70EL2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP45Q70EL2 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
USP45Q70EL2 TMTC2-201ENST00000321196 5681 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP45Q70EL2 COQ7-201ENST00000321998 2657 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP45Q70EL2 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP45Q70EL2 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP45Q70EL2 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC16.47■□□□□ 0.23
USP45Q70EL2 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC16.47■□□□□ 0.23
USP45Q70EL2 TMEM120A-201ENST00000417509 1444 ntTSL 2 BASIC16.47■□□□□ 0.23
USP45Q70EL2 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC16.47■□□□□ 0.23
USP45Q70EL2 PCDHA14-201ENST00000506751 2298 ntBASIC16.47■□□□□ 0.23
USP45Q70EL2 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC16.47■□□□□ 0.23
USP45Q70EL2 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC16.47■□□□□ 0.23
USP45Q70EL2 RPLP2-201ENST00000321153 781 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP45Q70EL2 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
USP45Q70EL2 HIST1H4J-201ENST00000355057 373 ntAPPRIS P1 BASIC16.47■□□□□ 0.23
USP45Q70EL2 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC16.47■□□□□ 0.23
USP45Q70EL2 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms