Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 AC064836.3-201ENST00000607928 673 ntBASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 MEIS3-206ENST00000559524 1828 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 DRC7-201ENST00000336825 2680 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 ABHD18-202ENST00000398965 2177 ntAPPRIS P1 TSL 2 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 AC022188.1-201ENST00000620960 1664 ntBASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 MOXD1-202ENST00000367963 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 DACT3-203ENST00000410105 3085 ntTSL 2 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 DUSP18-206ENST00000407308 1978 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 CLCNKA-203ENST00000439316 1997 ntTSL 2 BASIC14.84□□□□□ -0.03
NHLRC1Q6VVB1 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC14.83□□□□□ -0.03
NHLRC1Q6VVB1 PDZRN3-201ENST00000263666 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 COTL1-201ENST00000262428 1843 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 ESR2-201ENST00000267525 1518 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 CD99-204ENST00000381187 892 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 FALEC-201ENST00000416894 566 ntTSL 3 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 THTPA-204ENST00000554970 569 ntTSL 4 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 THTPA-206ENST00000556015 535 ntTSL 3 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 NUTF2-206ENST00000569436 1119 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 GIPC1-213ENST00000591349 1068 ntTSL 2 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 AC004877.2-201ENST00000623941 599 ntBASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 KDM4F-201ENST00000545950 1917 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 CDC25B-204ENST00000379598 2990 ntTSL 2 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 LCA10-201ENST00000618311 1392 ntTSL 2 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 C19orf54-201ENST00000378313 2753 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC14.83□□□□□ -0.04
NHLRC1Q6VVB1 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 SH2B1-206ENST00000545570 1488 ntTSL 2 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 ARMC6-203ENST00000392336 1866 ntTSL 2 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 NAT9-210ENST00000580301 1860 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 CTCFL-215ENST00000608158 1984 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 CDK2AP2P3-201ENST00000422476 372 ntBASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 GSTK1-207ENST00000479303 1185 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 PIN1-206ENST00000587625 878 ntTSL 2 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 WDR45-239ENST00000634944 1745 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 SLC17A7-204ENST00000600601 2237 ntTSL 2 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 ITM2C-201ENST00000326407 1888 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 LINC00942-201ENST00000515614 2417 ntTSL 5 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 HAPLN3-201ENST00000359595 1980 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 CTSD-213ENST00000637915 1982 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 CYP2T1P-202ENST00000641596 2535 ntBASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 HPCAL1-208ENST00000622018 1535 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
NHLRC1Q6VVB1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 GULP1-209ENST00000410051 1595 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC14.81□□□□□ -0.04
NHLRC1Q6VVB1 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 62.2 ms