Protein–RNA interactions for Protein: Q6PEY2

TUBA3E, Tubulin alpha-3E chain, humanhuman

Predictions only

Length 450 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA3EQ6PEY2 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 MED16-214ENST00000617672 554 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 RASA4-204ENST00000462172 2634 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 ZC3H7B-201ENST00000352645 5909 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 AHRR-203ENST00000505113 2173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 TSPY26P-202ENST00000565928 3884 ntBASIC15.68■□□□□ 0.1
TUBA3EQ6PEY2 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 CES3-203ENST00000543856 3178 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 VIPR1-204ENST00000438259 2427 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 HNRNPRP1-201ENST00000453465 1695 ntBASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 AC116353.5-201ENST00000638148 1699 ntBASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 TSSC2-204ENST00000529482 2337 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 C1orf115-201ENST00000294889 3413 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 OSGEP-201ENST00000206542 2002 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 LYPLAL1-201ENST00000366927 1819 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 ATP23-201ENST00000300145 1245 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 NEK7-201ENST00000367383 586 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 AC254562.1-201ENST00000417586 456 ntBASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 AL031432.2-201ENST00000566714 459 ntBASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 AL928711.1-201ENST00000570165 459 ntBASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 AC010618.3-201ENST00000596643 775 ntTSL 3 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 AC068137.2-201ENST00000605408 478 ntBASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 AC091812.2-201ENST00000619081 385 ntBASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 BTN1A1-202ENST00000613186 2266 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 AC087289.2-201ENST00000587267 1419 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 RHD-207ENST00000454452 1303 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
TUBA3EQ6PEY2 NFE2L2-201ENST00000397062 2853 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 IL12RB2-205ENST00000541374 3849 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 AC132872.4-202ENST00000622924 2756 ntBASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 AD000671.3-202ENST00000591091 1712 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 PIK3CD-AS2-201ENST00000415330 939 ntTSL 5 BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 PMS2P2-201ENST00000425039 1128 ntBASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 AC013270.1-201ENST00000425578 440 ntTSL 2 BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC15.66■□□□□ 0.1
TUBA3EQ6PEY2 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Retrieved 100 of 98,524 protein–RNA pairs in 80.3 ms