Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 ZDHHC3-201ENST00000296127 3101 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 PCGF1-201ENST00000233630 1792 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 CACNA1A-202ENST00000573710 7569 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 AC132938.5-201ENST00000624980 1813 ntBASIC15.57■□□□□ 0.08
LPCAT4Q643R3 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 ZNF451-201ENST00000357489 4998 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 CTBP1-209ENST00000510568 4250 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 RSPRY1-202ENST00000537866 3586 ntAPPRIS P1 TSL 2 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 CCNDBP1-201ENST00000300213 3660 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 PTPRA-201ENST00000216877 3725 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 MIR1238-201ENST00000408483 83 ntBASIC15.57■□□□□ 0.08
LPCAT4Q643R3 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 IFT20-215ENST00000585313 852 ntAPPRIS P4 TSL 3 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 FCGRT-210ENST00000596975 1054 ntTSL 5 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 FRA10AC1-201ENST00000359204 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 KCNC3-202ENST00000474951 3347 ntTSL 2 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 AC005840.4-201ENST00000541242 2494 ntBASIC15.57■□□□□ 0.08
LPCAT4Q643R3 CERK-201ENST00000216264 4450 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 HEATR3-201ENST00000299192 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 MIR155HG-201ENST00000456917 1600 ntTSL 5 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 C16orf58-211ENST00000570164 2783 ntAPPRIS ALT1 TSL 5 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 PHF23-202ENST00000454255 1662 ntTSL 2 BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 FSIP1-201ENST00000350221 2805 ntAPPRIS P2 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 GRK6P1-201ENST00000400595 1711 ntBASIC15.57■□□□□ 0.08
LPCAT4Q643R3 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
LPCAT4Q643R3 ATP6AP2-215ENST00000636409 1962 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 MLPH-203ENST00000409373 2031 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 ZNF135-202ENST00000359978 2120 ntTSL 2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 CHD4-210ENST00000544040 6514 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 KCNT1-207ENST00000487664 3845 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 TMEM38A-201ENST00000187762 2649 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 EIF3J-AS1-201ENST00000313807 2863 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 RNF157-202ENST00000319945 2937 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 PLEKHA4-201ENST00000263265 3088 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 HLA-F-220ENST00000434407 884 ntBASIC15.56■□□□□ 0.08
LPCAT4Q643R3 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 PDXP-202ENST00000403251 1571 ntTSL 2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 AC092919.2-201ENST00000623631 1645 ntBASIC15.56■□□□□ 0.08
LPCAT4Q643R3 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 RIOX2-202ENST00000360258 2232 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 GAD2-201ENST00000259271 2462 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 MAPK7-204ENST00000395604 3077 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 PPP1R26P4-201ENST00000619065 3527 ntBASIC15.56■□□□□ 0.08
LPCAT4Q643R3 ZNF74-209ENST00000611540 3714 ntAPPRIS P2 TSL 2 BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 TERT-201ENST00000310581 4018 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.56■□□□□ 0.08
LPCAT4Q643R3 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms