Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 TBRG4-202ENST00000361278 1917 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 KRT35-202ENST00000393989 1670 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 RCOR3-204ENST00000452621 1827 ntTSL 2 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 AL645728.1-201ENST00000366221 2101 ntBASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 KRTAP5-9-201ENST00000528743 1136 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 IKBKE-204ENST00000584998 2487 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 FOSB-211ENST00000592436 1057 ntTSL 5 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 AC026120.1-201ENST00000611536 926 ntBASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 AC008741.2-201ENST00000612792 3115 ntBASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 NBL1-211ENST00000618761 2051 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 LAMC1-201ENST00000258341 7889 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TTC39BQ5VTQ0 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 TAB1-202ENST00000331454 1660 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 SMIM10-201ENST00000330288 1536 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 JADE2-201ENST00000282605 2748 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 ITPRIPL1-205ENST00000536814 1947 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 LINC00963-208ENST00000454968 1403 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 RGN-203ENST00000397180 2257 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 BATF2-201ENST00000301887 2142 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 STOM-202ENST00000347359 870 ntTSL 2 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 CD99-202ENST00000381180 530 ntTSL 2 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 TWIST2-201ENST00000448943 1176 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 DNAJB3-202ENST00000449667 1266 ntBASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 HLA-J-202ENST00000469281 1241 ntBASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 SNHG9-202ENST00000564014 471 ntBASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 AL513210.1-201ENST00000629608 234 ntBASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 NBPF11-205ENST00000615281 5494 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 GYG1-201ENST00000296048 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 AGK-211ENST00000629555 2765 ntTSL 5 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 PC-204ENST00000524491 1714 ntTSL 2 BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TTC39BQ5VTQ0 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 SEMA4B-202ENST00000411539 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 PCDHA1-201ENST00000378133 2726 ntBASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 PDE4C-202ENST00000355502 5979 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 TFAMP1-201ENST00000412727 736 ntBASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 SPDYE11-202ENST00000450699 704 ntBASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 AC018730.1-201ENST00000454183 327 ntTSL 3 BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 AL135744.1-201ENST00000565098 629 ntBASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 SPDYE9P-201ENST00000570642 692 ntBASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 FLYWCH2-203ENST00000572006 754 ntAPPRIS ALT2 TSL 2 BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 AP001160.2-201ENST00000596071 487 ntBASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 SPDYE10P-202ENST00000612005 668 ntBASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 SPDYE8P-202ENST00000612377 668 ntBASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 AC105339.1-204ENST00000636249 355 ntBASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 AC131160.1-201ENST00000639401 3058 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 ASAH1-231ENST00000636577 2129 ntTSL 5 BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 GALNT9-202ENST00000397325 1727 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 F10-202ENST00000375559 1517 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 BHMT2-205ENST00000521567 1537 ntTSL 2 BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 ZCCHC3-201ENST00000500893 3354 ntAPPRIS P1 BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 CLMAT3-201ENST00000510576 1973 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 CHCHD3-201ENST00000262570 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
TTC39BQ5VTQ0 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms