Protein–RNA interactions for Protein: Q53TQ3

INO80D, INO80 complex subunit D, humanhuman

Predicted RBP Predictions only

Length 878 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
INO80DQ53TQ3 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
INO80DQ53TQ3 FAM222B-211ENST00000582266 2613 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
INO80DQ53TQ3 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC16.68■□□□□ 0.26
INO80DQ53TQ3 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
INO80DQ53TQ3 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC16.68■□□□□ 0.26
INO80DQ53TQ3 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
INO80DQ53TQ3 CFAP43-203ENST00000369719 1434 ntTSL 2 BASIC16.68■□□□□ 0.26
INO80DQ53TQ3 SNED1-202ENST00000342631 1930 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
INO80DQ53TQ3 FAM49B-223ENST00000522746 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
INO80DQ53TQ3 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC16.68■□□□□ 0.26
INO80DQ53TQ3 AIFM1-202ENST00000319908 2248 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
INO80DQ53TQ3 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 SLC39A13-201ENST00000354884 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 PCK2-205ENST00000558096 2433 ntTSL 2 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 AL589702.1-201ENST00000641229 1509 ntBASIC16.67■□□□□ 0.26
INO80DQ53TQ3 BMP4-201ENST00000245451 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 MFNG-201ENST00000356998 2088 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 CSNK1G2-AS1-201ENST00000314315 1252 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 FAM220BP-201ENST00000377689 816 ntBASIC16.67■□□□□ 0.26
INO80DQ53TQ3 VCX-202ENST00000381059 967 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 CAPG-205ENST00000409921 1195 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 RPL8-207ENST00000528957 1015 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 AC131009.1-201ENST00000539078 426 ntTSL 5 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 DAD1-205ENST00000543337 501 ntTSL 3 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 AP001059.3-201ENST00000619053 235 ntBASIC16.67■□□□□ 0.26
INO80DQ53TQ3 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 GGT5-203ENST00000398292 2408 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 KRT18P28-201ENST00000453838 1332 ntBASIC16.67■□□□□ 0.26
INO80DQ53TQ3 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 AC105760.2-201ENST00000418430 2341 ntTSL 2 BASIC16.67■□□□□ 0.26
INO80DQ53TQ3 TBRG4-203ENST00000395655 2225 ntTSL 2 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 PHKG2-201ENST00000328273 1536 ntAPPRIS ALT1 TSL 5 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 PIGT-221ENST00000638594 1835 ntTSL 5 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 MUL1-201ENST00000264198 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 LIM2-201ENST00000221973 983 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 AL139400.1-201ENST00000366220 510 ntBASIC16.66■□□□□ 0.26
INO80DQ53TQ3 CEP19-201ENST00000399942 1172 ntAPPRIS ALT2 TSL 5 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 PRR30-202ENST00000432962 1440 ntAPPRIS ALT2 TSL 3 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 RBPMS2P1-201ENST00000437762 623 ntBASIC16.66■□□□□ 0.26
INO80DQ53TQ3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 GATD1-206ENST00000526325 756 ntTSL 5 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 LINC00628-201ENST00000628516 1289 ntBASIC16.66■□□□□ 0.26
INO80DQ53TQ3 CLN3-255ENST00000637100 1284 ntTSL 5 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 CLU-215ENST00000523500 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 PGAP3-211ENST00000619169 2094 ntTSL 2 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 GOLGA2P9-201ENST00000596977 1937 ntBASIC16.66■□□□□ 0.26
INO80DQ53TQ3 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 AARSD1-202ENST00000427569 1322 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 LTK-204ENST00000561619 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
INO80DQ53TQ3 FAM181B-201ENST00000329203 3924 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
INO80DQ53TQ3 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
INO80DQ53TQ3 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.65■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms