Protein–RNA interactions for Protein: Q09470

KCNA1, Potassium voltage-gated channel subfamily A member 1, humanhuman

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA1Q09470 NPNT-201ENST00000305572 3003 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 SLC25A45-201ENST00000294187 2196 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 SNAPC3-202ENST00000380821 5680 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 KCNQ2-209ENST00000625514 2925 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA1Q09470 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA1Q09470 AKAP8P1-201ENST00000434743 1349 ntBASIC18.07■□□□□ 0.48
KCNA1Q09470 GALNT10-203ENST00000425427 4344 ntTSL 2 BASIC18.07■□□□□ 0.48
KCNA1Q09470 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC18.07■□□□□ 0.48
KCNA1Q09470 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC18.07■□□□□ 0.48
KCNA1Q09470 COA5-202ENST00000409997 557 ntTSL 4 BASIC18.07■□□□□ 0.48
KCNA1Q09470 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC18.07■□□□□ 0.48
KCNA1Q09470 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.07■□□□□ 0.48
KCNA1Q09470 AC079140.1-201ENST00000508039 487 ntBASIC18.07■□□□□ 0.48
KCNA1Q09470 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC18.07■□□□□ 0.48
KCNA1Q09470 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA1Q09470 LINC01225-203ENST00000563550 1244 ntBASIC18.07■□□□□ 0.48
KCNA1Q09470 AC133550.1-201ENST00000563565 295 ntTSL 3 BASIC18.07■□□□□ 0.48
KCNA1Q09470 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA1Q09470 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 AC004832.1-201ENST00000610936 1005 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA1Q09470 AC026120.1-201ENST00000611536 926 ntBASIC18.07■□□□□ 0.48
KCNA1Q09470 AC090164.4-201ENST00000632451 313 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA1Q09470 AC247036.6-201ENST00000632950 410 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
KCNA1Q09470 MCM3AP-AS1-202ENST00000420074 1947 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 BTN3A1-204ENST00000425234 1882 ntTSL 2 BASIC18.07■□□□□ 0.48
KCNA1Q09470 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 PGR-209ENST00000617858 2816 ntTSL 5 BASIC18.07■□□□□ 0.48
KCNA1Q09470 WNT10B-203ENST00000407467 1802 ntTSL 2 BASIC18.07■□□□□ 0.48
KCNA1Q09470 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC18.07■□□□□ 0.48
KCNA1Q09470 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 SYBU-230ENST00000532779 2765 ntAPPRIS ALT2 TSL 2 BASIC18.07■□□□□ 0.48
KCNA1Q09470 ELF3-201ENST00000359651 4994 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KCNA1Q09470 FBXW9-201ENST00000393261 1738 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 CLPTM1L-216ENST00000630539 2032 ntTSL 5 BASIC18.06■□□□□ 0.48
KCNA1Q09470 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
KCNA1Q09470 RALGDS-205ENST00000393160 3801 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 GCFC2-202ENST00000409857 2516 ntTSL 5 BASIC18.06■□□□□ 0.48
KCNA1Q09470 NSUN5-202ENST00000310326 1602 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
KCNA1Q09470 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC18.06■□□□□ 0.48
KCNA1Q09470 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC18.06■□□□□ 0.48
KCNA1Q09470 SP100-204ENST00000409341 1898 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 TEKT4P2-201ENST00000416067 1599 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 ZNF671-201ENST00000317398 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
KCNA1Q09470 ALKBH6-202ENST00000378875 973 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
KCNA1Q09470 SPCS2P4-201ENST00000436160 681 ntBASIC18.06■□□□□ 0.48
KCNA1Q09470 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC18.06■□□□□ 0.48
KCNA1Q09470 ACTG1P14-201ENST00000446382 1122 ntBASIC18.06■□□□□ 0.48
KCNA1Q09470 TIMM8BP1-201ENST00000452384 211 ntBASIC18.06■□□□□ 0.48
KCNA1Q09470 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC18.06■□□□□ 0.48
KCNA1Q09470 FAM153C-206ENST00000507848 1071 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
KCNA1Q09470 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.06■□□□□ 0.48
KCNA1Q09470 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC18.06■□□□□ 0.48
KCNA1Q09470 RAMP2-205ENST00000589683 858 ntTSL 3 BASIC18.06■□□□□ 0.48
KCNA1Q09470 AC010503.2-201ENST00000599292 296 ntTSL 3 BASIC18.06■□□□□ 0.48
KCNA1Q09470 AC105339.1-204ENST00000636249 355 ntBASIC18.06■□□□□ 0.48
KCNA1Q09470 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 BORCS8-203ENST00000477565 1489 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 SLC25A45-202ENST00000398802 2286 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
KCNA1Q09470 MYO3A-206ENST00000543632 2203 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 MAP3K9-201ENST00000381250 4025 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
KCNA1Q09470 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
KCNA1Q09470 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC18.06■□□□□ 0.48
KCNA1Q09470 SYT12-203ENST00000525457 1678 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KCNA1Q09470 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KCNA1Q09470 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KCNA1Q09470 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC18.06■□□□□ 0.48
KCNA1Q09470 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
KCNA1Q09470 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA1Q09470 BBS2-218ENST00000568104 2623 ntTSL 5 BASIC18.05■□□□□ 0.48
KCNA1Q09470 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
KCNA1Q09470 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA1Q09470 DYRK3-201ENST00000367106 2329 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA1Q09470 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.05■□□□□ 0.48
KCNA1Q09470 HMBS-209ENST00000537841 1559 ntTSL 5 BASIC18.05■□□□□ 0.48
KCNA1Q09470 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA1Q09470 OPCML-202ENST00000374778 1302 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA1Q09470 IQCC-202ENST00000537469 2252 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KCNA1Q09470 ASAH1-223ENST00000636171 2283 ntTSL 5 BASIC18.05■□□□□ 0.48
KCNA1Q09470 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC18.05■□□□□ 0.48
KCNA1Q09470 BID-201ENST00000317361 2495 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 29.9 ms