Protein–RNA interactions for Protein: Q00535

CDK5, Cyclin-dependent-like kinase 5, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5Q00535 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC14.88□□□□□ -0.03
CDK5Q00535 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 CNGA4-201ENST00000379936 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.88□□□□□ -0.03
CDK5Q00535 FAM151A-201ENST00000302250 2005 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
CDK5Q00535 CACFD1-207ENST00000542192 2754 ntTSL 2 BASIC14.88□□□□□ -0.03
CDK5Q00535 NUS1-201ENST00000368494 4676 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
CDK5Q00535 AC092919.2-201ENST00000623631 1645 ntBASIC14.88□□□□□ -0.03
CDK5Q00535 SMARCD2-202ENST00000323347 1935 ntTSL 2 BASIC14.88□□□□□ -0.03
CDK5Q00535 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDK5Q00535 ANKRD17-201ENST00000330838 7734 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
CDK5Q00535 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC14.87□□□□□ -0.03
CDK5Q00535 LCK-206ENST00000373564 2137 ntTSL 5 BASIC14.87□□□□□ -0.03
CDK5Q00535 ARHGEF4-205ENST00000409359 5489 ntTSL 5 BASIC14.87□□□□□ -0.03
CDK5Q00535 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 FAM131B-206ENST00000443739 4382 ntAPPRIS ALT1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 APH1A-203ENST00000369109 1713 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 AC008677.1-201ENST00000519230 1561 ntBASIC14.87□□□□□ -0.03
CDK5Q00535 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC14.87□□□□□ -0.03
CDK5Q00535 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC14.87□□□□□ -0.03
CDK5Q00535 CBX7-202ENST00000401405 784 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 LSM5-204ENST00000409909 740 ntTSL 2 BASIC14.87□□□□□ -0.03
CDK5Q00535 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC14.87□□□□□ -0.03
CDK5Q00535 ELK2BP-201ENST00000415014 1224 ntBASIC14.87□□□□□ -0.03
CDK5Q00535 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
CDK5Q00535 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 AL162431.1-201ENST00000434447 543 ntTSL 3 BASIC14.87□□□□□ -0.03
CDK5Q00535 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC14.87□□□□□ -0.03
CDK5Q00535 CBR1-203ENST00000439427 1024 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 PMF1-BGLAP-203ENST00000490491 1007 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDK5Q00535 FOSL1P1-201ENST00000511041 816 ntBASIC14.87□□□□□ -0.03
CDK5Q00535 MMP17-203ENST00000535004 719 ntTSL 3 BASIC14.87□□□□□ -0.03
CDK5Q00535 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 GGTLC5P-201ENST00000617623 998 ntBASIC14.87□□□□□ -0.03
CDK5Q00535 AC087645.4-201ENST00000638890 792 ntTSL 5 BASIC14.87□□□□□ -0.03
CDK5Q00535 ADAMTS18-201ENST00000282849 5913 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 EIF2AK4-208ENST00000559624 3548 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC14.87□□□□□ -0.03
CDK5Q00535 BTBD3-201ENST00000254977 4686 ntAPPRIS ALT1 TSL 2 BASIC14.87□□□□□ -0.03
CDK5Q00535 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
CDK5Q00535 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC14.87□□□□□ -0.03
CDK5Q00535 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 DMAC2-210ENST00000592922 1622 ntTSL 2 BASIC14.87□□□□□ -0.03
CDK5Q00535 TSPEAR-202ENST00000397916 2114 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 ASS1-204ENST00000372394 1973 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
CDK5Q00535 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC14.87□□□□□ -0.03
CDK5Q00535 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 C3orf67-201ENST00000295966 2650 ntTSL 2 BASIC14.87□□□□□ -0.03
CDK5Q00535 CCDC144B-202ENST00000445752 2197 ntTSL 2 BASIC14.87□□□□□ -0.03
CDK5Q00535 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
CDK5Q00535 TSPY26P-202ENST00000565928 3884 ntBASIC14.87□□□□□ -0.03
CDK5Q00535 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.87□□□□□ -0.03
CDK5Q00535 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK5Q00535 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK5Q00535 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK5Q00535 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK5Q00535 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDK5Q00535 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC14.86□□□□□ -0.03
CDK5Q00535 INPP4A-202ENST00000409016 9996 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK5Q00535 TUBB8-201ENST00000561967 1413 ntTSL 5 BASIC14.86□□□□□ -0.03
CDK5Q00535 NOTO-201ENST00000398468 2749 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDK5Q00535 DPM2-202ENST00000373110 738 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK5Q00535 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC14.86□□□□□ -0.03
CDK5Q00535 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK5Q00535 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC14.86□□□□□ -0.03
CDK5Q00535 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC14.86□□□□□ -0.03
CDK5Q00535 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
CDK5Q00535 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK5Q00535 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK5Q00535 ACP2-201ENST00000256997 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK5Q00535 CCDC144A-202ENST00000340621 2214 ntTSL 2 BASIC14.86□□□□□ -0.03
CDK5Q00535 APP-204ENST00000357903 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK5Q00535 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
CDK5Q00535 SUFU-202ENST00000369902 5001 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK5Q00535 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK5Q00535 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC14.86□□□□□ -0.03
CDK5Q00535 SPDEF-202ENST00000544425 1866 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
CDK5Q00535 UNG-201ENST00000242576 2071 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK5Q00535 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK5Q00535 IKZF4-206ENST00000547791 1712 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
CDK5Q00535 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
CDK5Q00535 DKFZP434H168-201ENST00000567381 1905 ntBASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 90.8 ms