Protein–RNA interactions for Protein: P78348

ASIC1, Acid-sensing ion channel 1, humanhuman

Predictions only

Length 528 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ASIC1P78348 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC18.41■□□□□ 0.54
ASIC1P78348 KRT19P2-202ENST00000557173 1012 ntBASIC18.41■□□□□ 0.54
ASIC1P78348 MIOS-202ENST00000405785 3095 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
ASIC1P78348 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ASIC1P78348 NR2C1-203ENST00000393101 1822 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
ASIC1P78348 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ASIC1P78348 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ASIC1P78348 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC18.41■□□□□ 0.54
ASIC1P78348 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC18.41■□□□□ 0.54
ASIC1P78348 REXO1L8P-201ENST00000604378 1897 ntBASIC18.41■□□□□ 0.54
ASIC1P78348 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC18.41■□□□□ 0.54
ASIC1P78348 GPER1-206ENST00000617001 1900 ntTSL 5 BASIC18.41■□□□□ 0.54
ASIC1P78348 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC18.41■□□□□ 0.54
ASIC1P78348 AL596087.1-201ENST00000400979 1969 ntBASIC18.41■□□□□ 0.54
ASIC1P78348 EWSR1-201ENST00000331029 2267 ntTSL 5 BASIC18.4■□□□□ 0.54
ASIC1P78348 FLAD1-203ENST00000315144 1730 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ASIC1P78348 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC18.4■□□□□ 0.54
ASIC1P78348 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ASIC1P78348 IGSF8-202ENST00000368086 2366 ntAPPRIS P2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ASIC1P78348 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ASIC1P78348 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ASIC1P78348 HLA-B-249ENST00000412585 1547 ntAPPRIS P1 BASIC18.4■□□□□ 0.54
ASIC1P78348 SLC25A35-205ENST00000580340 1541 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ASIC1P78348 CMKLR1-204ENST00000550402 1893 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
ASIC1P78348 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC18.4■□□□□ 0.54
ASIC1P78348 FBXL21-206ENST00000495672 589 ntTSL 4 BASIC18.4■□□□□ 0.54
ASIC1P78348 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC18.4■□□□□ 0.54
ASIC1P78348 THTPA-204ENST00000554970 569 ntTSL 4 BASIC18.4■□□□□ 0.54
ASIC1P78348 THTPA-206ENST00000556015 535 ntTSL 3 BASIC18.4■□□□□ 0.54
ASIC1P78348 CD7-202ENST00000578509 925 ntTSL 3 BASIC18.4■□□□□ 0.54
ASIC1P78348 TMEM220-AS1-206ENST00000583343 876 ntTSL 3 BASIC18.4■□□□□ 0.54
ASIC1P78348 METTL23-202ENST00000586200 465 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ASIC1P78348 METTL23-212ENST00000590964 1006 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
ASIC1P78348 MED16-214ENST00000617672 554 ntTSL 5 BASIC18.4■□□□□ 0.54
ASIC1P78348 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
ASIC1P78348 FADS1-216ENST00000542506 1725 ntTSL 2 BASIC18.4■□□□□ 0.54
ASIC1P78348 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC18.4■□□□□ 0.54
ASIC1P78348 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC18.4■□□□□ 0.54
ASIC1P78348 RTL6-201ENST00000341255 5495 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.54
ASIC1P78348 SCP2-201ENST00000371509 1889 ntTSL 1 (best) BASIC18.39■□□□□ 0.54
ASIC1P78348 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC18.39■□□□□ 0.54
ASIC1P78348 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC18.39■□□□□ 0.54
ASIC1P78348 ARSI-201ENST00000328668 3161 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 SMAP1-201ENST00000316999 2403 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 MRGPRD-201ENST00000309106 966 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ASIC1P78348 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC18.39■□□□□ 0.53
ASIC1P78348 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC18.39■□□□□ 0.53
ASIC1P78348 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC18.39■□□□□ 0.53
ASIC1P78348 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 NMU-203ENST00000507338 658 ntTSL 3 BASIC18.39■□□□□ 0.53
ASIC1P78348 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.39■□□□□ 0.53
ASIC1P78348 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 TMEM97-205ENST00000583381 578 ntTSL 4 BASIC18.39■□□□□ 0.53
ASIC1P78348 AC004597.1-201ENST00000595525 561 ntTSL 4 BASIC18.39■□□□□ 0.53
ASIC1P78348 AL009183.1-201ENST00000603760 355 ntBASIC18.39■□□□□ 0.53
ASIC1P78348 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.39■□□□□ 0.53
ASIC1P78348 PGLYRP1-201ENST00000008938 720 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 TNFRSF13C-201ENST00000291232 3944 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 INTS11-247ENST00000540437 2629 ntTSL 2 BASIC18.39■□□□□ 0.53
ASIC1P78348 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC18.39■□□□□ 0.53
ASIC1P78348 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 TMEM19-201ENST00000266673 5656 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 BCL2L12-202ENST00000246785 1431 ntAPPRIS P3 TSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 KLC4-202ENST00000347162 2404 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 PITPNA-201ENST00000313486 3912 ntAPPRIS P2 TSL 5 BASIC18.39■□□□□ 0.53
ASIC1P78348 COQ8B-201ENST00000243583 2041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 SIRT6-201ENST00000305232 1506 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
ASIC1P78348 RHCE-201ENST00000294413 1591 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ASIC1P78348 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 IQCE-210ENST00000438376 2170 ntAPPRIS ALT2 TSL 5 BASIC18.38■□□□□ 0.53
ASIC1P78348 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 SCP2-204ENST00000407246 2239 ntTSL 2 BASIC18.38■□□□□ 0.53
ASIC1P78348 ASB7-202ENST00000343276 1694 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 OTUB1-202ENST00000422031 2297 ntAPPRIS ALT1 TSL 5 BASIC18.38■□□□□ 0.53
ASIC1P78348 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 ZSCAN10-201ENST00000252463 2463 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 JPH4-202ENST00000397118 4386 ntAPPRIS P2 TSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 REPS1-201ENST00000258062 3161 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 PF4-201ENST00000296029 604 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.38■□□□□ 0.53
ASIC1P78348 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC18.38■□□□□ 0.53
ASIC1P78348 SUMO1-201ENST00000392244 831 ntTSL 2 BASIC18.38■□□□□ 0.53
ASIC1P78348 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC18.38■□□□□ 0.53
ASIC1P78348 SUMO1-209ENST00000409712 761 ntTSL 2 BASIC18.38■□□□□ 0.53
ASIC1P78348 LEPROTL1-203ENST00000518001 589 ntTSL 4 BASIC18.38■□□□□ 0.53
ASIC1P78348 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC18.38■□□□□ 0.53
ASIC1P78348 MIF4GD-205ENST00000578305 569 ntTSL 5 BASIC18.38■□□□□ 0.53
ASIC1P78348 CDC42EP4-209ENST00000630622 240 ntTSL 5 BASIC18.38■□□□□ 0.53
ASIC1P78348 TFAP2B-202ENST00000393655 5773 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 NSUN2-201ENST00000264670 3303 ntAPPRIS P3 TSL 1 (best) BASIC18.38■□□□□ 0.53
ASIC1P78348 VAV2-201ENST00000371850 4837 ntTSL 1 (best) BASIC18.38■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 29.2 ms