Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP46P62068 HYAL3-201ENST00000336307 1942 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP46P62068 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP46P62068 MYOD1-201ENST00000250003 1801 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP46P62068 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP46P62068 UBALD1-205ENST00000590891 2641 ntBASIC17.33■□□□□ 0.36
USP46P62068 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
USP46P62068 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.33■□□□□ 0.36
USP46P62068 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP46P62068 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.33■□□□□ 0.36
USP46P62068 TGIF1-205ENST00000401449 1670 ntTSL 2 BASIC17.32■□□□□ 0.36
USP46P62068 FLJ38576-201ENST00000623820 2459 ntBASIC17.32■□□□□ 0.36
USP46P62068 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.32■□□□□ 0.36
USP46P62068 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
USP46P62068 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 HOXB5-201ENST00000239151 2041 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 GPR108-202ENST00000430424 2009 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
USP46P62068 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
USP46P62068 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
USP46P62068 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC17.32■□□□□ 0.36
USP46P62068 C9orf62-201ENST00000623103 1924 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 S100A14-204ENST00000368702 1218 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
USP46P62068 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 AP1S3-202ENST00000396653 589 ntTSL 4 BASIC17.32■□□□□ 0.36
USP46P62068 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC17.32■□□□□ 0.36
USP46P62068 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC17.32■□□□□ 0.36
USP46P62068 AC022201.2-201ENST00000445084 287 ntTSL 5 BASIC17.32■□□□□ 0.36
USP46P62068 S100A14-206ENST00000476873 1025 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 TPT1-AS1-219ENST00000523506 574 ntTSL 4 BASIC17.32■□□□□ 0.36
USP46P62068 ASXL1-206ENST00000542461 1068 ntTSL 5 BASIC17.32■□□□□ 0.36
USP46P62068 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.32■□□□□ 0.36
USP46P62068 AJ003147.2-201ENST00000576468 629 ntTSL 3 BASIC17.32■□□□□ 0.36
USP46P62068 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.32■□□□□ 0.36
USP46P62068 MIR6080-201ENST00000617359 66 ntBASIC17.32■□□□□ 0.36
USP46P62068 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC17.32■□□□□ 0.36
USP46P62068 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 TMEM161A-201ENST00000162044 1820 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 NAPA-AS1-201ENST00000593284 1753 ntTSL 2 BASIC17.32■□□□□ 0.36
USP46P62068 ACSM2A-213ENST00000575690 2322 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
USP46P62068 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.32■□□□□ 0.36
USP46P62068 NCALD-217ENST00000521599 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 PACS1-209ENST00000529757 1688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 MEX3C-204ENST00000616921 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP46P62068 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.32■□□□□ 0.36
USP46P62068 AC100830.1-201ENST00000560387 1609 ntTSL 2 BASIC17.32■□□□□ 0.36
USP46P62068 NR4A2-210ENST00000429376 1571 ntTSL 5 BASIC17.32■□□□□ 0.36
USP46P62068 AC006538.1-201ENST00000567905 1585 ntBASIC17.32■□□□□ 0.36
USP46P62068 AP3S2-216ENST00000617003 1561 ntBASIC17.32■□□□□ 0.36
USP46P62068 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC17.31■□□□□ 0.36
USP46P62068 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 NPRL3-211ENST00000611875 2881 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
USP46P62068 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 SLC10A3-203ENST00000393586 1893 ntTSL 5 BASIC17.31■□□□□ 0.36
USP46P62068 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.31■□□□□ 0.36
USP46P62068 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 MAGEA2-201ENST00000595583 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
USP46P62068 ASPH-211ENST00000518068 2744 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 GPAA1P2-202ENST00000606848 1787 ntBASIC17.31■□□□□ 0.36
USP46P62068 TSPAN4-208ENST00000409531 1339 ntTSL 5 BASIC17.31■□□□□ 0.36
USP46P62068 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
USP46P62068 GALNT14-201ENST00000324589 2169 ntTSL 2 BASIC17.31■□□□□ 0.36
USP46P62068 ARCN1-203ENST00000392859 1709 ntTSL 2 BASIC17.31■□□□□ 0.36
USP46P62068 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC17.31■□□□□ 0.36
USP46P62068 WRB-204ENST00000398753 699 ntTSL 3 BASIC17.31■□□□□ 0.36
USP46P62068 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC17.31■□□□□ 0.36
USP46P62068 SYS1-203ENST00000414310 795 ntTSL 3 BASIC17.31■□□□□ 0.36
USP46P62068 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 SAPCD1-209ENST00000425424 820 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
USP46P62068 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.31■□□□□ 0.36
USP46P62068 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.31■□□□□ 0.36
USP46P62068 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.31■□□□□ 0.36
USP46P62068 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 C10orf107-201ENST00000330194 1685 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 AL512625.3-203ENST00000445604 1602 ntTSL 5 BASIC17.31■□□□□ 0.36
USP46P62068 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 LFNG-207ENST00000614382 1969 ntTSL 5 BASIC17.31■□□□□ 0.36
USP46P62068 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC17.31■□□□□ 0.36
USP46P62068 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP46P62068 AC139530.2-201ENST00000571730 1922 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
USP46P62068 CCDC130-204ENST00000586600 1922 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
USP46P62068 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 38 ms