Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC14.51□□□□□ -0.09
SEC61A1P61619 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SEC61A1P61619 TMEM127-201ENST00000258439 6266 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SEC61A1P61619 CASK-202ENST00000378158 3848 ntTSL 5 BASIC14.51□□□□□ -0.09
SEC61A1P61619 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SEC61A1P61619 AC092053.1-201ENST00000605787 1936 ntBASIC14.51□□□□□ -0.09
SEC61A1P61619 ASIC1-201ENST00000228468 4072 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SEC61A1P61619 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SEC61A1P61619 PSME3-202ENST00000441946 2944 ntTSL 2 BASIC14.51□□□□□ -0.09
SEC61A1P61619 C5orf30-202ENST00000510890 2933 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SEC61A1P61619 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SEC61A1P61619 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SEC61A1P61619 KCTD7-206ENST00000639828 5951 ntAPPRIS P3 TSL 2 BASIC14.51□□□□□ -0.09
SEC61A1P61619 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.51□□□□□ -0.09
SEC61A1P61619 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SEC61A1P61619 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
SEC61A1P61619 LAGE3P1-201ENST00000425356 484 ntBASIC14.51□□□□□ -0.09
SEC61A1P61619 RPL13AP23-201ENST00000480739 586 ntBASIC14.51□□□□□ -0.09
SEC61A1P61619 AC127496.4-201ENST00000571591 549 ntTSL 4 BASIC14.51□□□□□ -0.09
SEC61A1P61619 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC14.51□□□□□ -0.09
SEC61A1P61619 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
SEC61A1P61619 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC14.51□□□□□ -0.09
SEC61A1P61619 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SEC61A1P61619 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SEC61A1P61619 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.51□□□□□ -0.09
SEC61A1P61619 SHROOM2-201ENST00000380913 7447 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SEC61A1P61619 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC14.51□□□□□ -0.09
SEC61A1P61619 CMTM3-202ENST00000424011 2330 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SEC61A1P61619 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 PGAP3-201ENST00000300658 2737 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
SEC61A1P61619 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SEC61A1P61619 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 POM121C-206ENST00000607367 3690 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SEC61A1P61619 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 KCNT1-214ENST00000631073 3948 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SEC61A1P61619 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC14.5□□□□□ -0.09
SEC61A1P61619 AL391650.1-205ENST00000433939 579 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
SEC61A1P61619 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC14.5□□□□□ -0.09
SEC61A1P61619 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC14.5□□□□□ -0.09
SEC61A1P61619 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC14.5□□□□□ -0.09
SEC61A1P61619 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC14.5□□□□□ -0.09
SEC61A1P61619 IGHV3-22-201ENST00000520721 359 ntBASIC14.5□□□□□ -0.09
SEC61A1P61619 AL157871.1-202ENST00000556458 478 ntTSL 5 BASIC14.5□□□□□ -0.09
SEC61A1P61619 AC105339.3-201ENST00000560043 636 ntBASIC14.5□□□□□ -0.09
SEC61A1P61619 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC14.5□□□□□ -0.09
SEC61A1P61619 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC14.5□□□□□ -0.09
SEC61A1P61619 ASIC1-202ENST00000447966 3778 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SEC61A1P61619 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 FAM53B-202ENST00000337318 5431 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 SLC9A7P1-201ENST00000554295 3311 ntBASIC14.5□□□□□ -0.09
SEC61A1P61619 PCDHGB2-202ENST00000622527 2588 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SEC61A1P61619 PCCB-201ENST00000251654 1833 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 SLCO5A1-201ENST00000260126 9076 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC14.5□□□□□ -0.09
SEC61A1P61619 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 LY6K-205ENST00000522591 2724 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SEC61A1P61619 RFWD2-204ENST00000367669 3033 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SEC61A1P61619 ASTN2-201ENST00000288520 2356 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 IL2RG-202ENST00000374188 1432 ntTSL 5 BASIC14.49□□□□□ -0.09
SEC61A1P61619 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 PPP6R1-203ENST00000587283 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 LINC00671-201ENST00000301683 1958 ntTSL 2 BASIC14.49□□□□□ -0.09
SEC61A1P61619 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 ATG5-210ENST00000636437 2261 ntTSL 5 BASIC14.49□□□□□ -0.09
SEC61A1P61619 UNC13A-204ENST00000550896 5200 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SEC61A1P61619 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC14.49□□□□□ -0.09
SEC61A1P61619 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 GAL3ST1-203ENST00000402321 1908 ntAPPRIS P1 TSL 2 BASIC14.49□□□□□ -0.09
SEC61A1P61619 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC14.49□□□□□ -0.09
SEC61A1P61619 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.49□□□□□ -0.09
SEC61A1P61619 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC14.49□□□□□ -0.09
SEC61A1P61619 AC009336.1-201ENST00000608941 1553 ntBASIC14.49□□□□□ -0.09
SEC61A1P61619 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC14.49□□□□□ -0.09
SEC61A1P61619 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC14.49□□□□□ -0.09
SEC61A1P61619 INIP-202ENST00000374236 874 ntTSL 2 BASIC14.49□□□□□ -0.09
SEC61A1P61619 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC14.49□□□□□ -0.09
SEC61A1P61619 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC14.49□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms