Protein–RNA interactions for Protein: P61077

UBE2D3, Ubiquitin-conjugating enzyme E2 D3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3P61077 TSPY19P-201ENST00000418461 509 ntBASIC11.78□□□□□ -0.52
UBE2D3P61077 TSPY18P-201ENST00000441642 509 ntBASIC11.78□□□□□ -0.52
UBE2D3P61077 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2D3P61077 AC087163.2-201ENST00000457299 853 ntBASIC11.78□□□□□ -0.52
UBE2D3P61077 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC11.78□□□□□ -0.52
UBE2D3P61077 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2D3P61077 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC11.78□□□□□ -0.52
UBE2D3P61077 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC11.78□□□□□ -0.52
UBE2D3P61077 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC11.78□□□□□ -0.52
UBE2D3P61077 AC091304.2-201ENST00000564639 760 ntBASIC11.78□□□□□ -0.52
UBE2D3P61077 AC091167.2-201ENST00000579581 588 ntBASIC11.78□□□□□ -0.52
UBE2D3P61077 MPDU1-223ENST00000582151 728 ntBASIC11.78□□□□□ -0.52
UBE2D3P61077 SDCCAG3P1-201ENST00000589292 1150 ntBASIC11.78□□□□□ -0.52
UBE2D3P61077 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
UBE2D3P61077 AC104581.4-201ENST00000623126 3052 ntBASIC11.78□□□□□ -0.52
UBE2D3P61077 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 MAN1C1-203ENST00000374332 4641 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 MAN1C1-208ENST00000611903 4647 ntTSL 5 BASIC11.78□□□□□ -0.52
UBE2D3P61077 CNOT10-202ENST00000331889 2573 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 CSAD-202ENST00000379843 2086 ntTSL 5 BASIC11.78□□□□□ -0.52
UBE2D3P61077 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC11.78□□□□□ -0.52
UBE2D3P61077 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 KIF26A-201ENST00000315264 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 TTC13-201ENST00000366661 3253 ntAPPRIS P3 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
UBE2D3P61077 CCHCR1-202ENST00000396263 2490 ntTSL 5 BASIC11.78□□□□□ -0.52
UBE2D3P61077 AC002310.6-201ENST00000624451 1377 ntBASIC11.78□□□□□ -0.52
UBE2D3P61077 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC11.78□□□□□ -0.52
UBE2D3P61077 GGT3P-204ENST00000453783 1664 ntBASIC11.78□□□□□ -0.52
UBE2D3P61077 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D3P61077 SLIT1-204ENST00000371070 4564 ntTSL 5 BASIC11.77□□□□□ -0.52
UBE2D3P61077 ANKMY1-207ENST00000403283 2874 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D3P61077 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC11.77□□□□□ -0.52
UBE2D3P61077 PI4KAP1-204ENST00000612579 1703 ntBASIC11.77□□□□□ -0.52
UBE2D3P61077 FUT3-202ENST00000458379 2024 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D3P61077 CPEB2-203ENST00000382395 5524 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D3P61077 HMGXB3-202ENST00000503427 5275 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
UBE2D3P61077 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D3P61077 PPP1R26-205ENST00000605286 4744 ntAPPRIS P1 TSL 3 BASIC11.77□□□□□ -0.52
UBE2D3P61077 GFAP-233ENST00000639277 1783 ntTSL 5 BASIC11.77□□□□□ -0.52
UBE2D3P61077 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC11.77□□□□□ -0.52
UBE2D3P61077 CYB561D1-204ENST00000420578 3326 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D3P61077 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D3P61077 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D3P61077 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D3P61077 SERTAD1-201ENST00000357949 2114 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D3P61077 CFAP45-201ENST00000368099 1842 ntAPPRIS P2 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D3P61077 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.52
UBE2D3P61077 GMPPA-204ENST00000373908 1501 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.52
UBE2D3P61077 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
UBE2D3P61077 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC11.77□□□□□ -0.52
UBE2D3P61077 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC11.77□□□□□ -0.53
UBE2D3P61077 IGF2-202ENST00000381392 1005 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 PTCHD3P3-201ENST00000403073 906 ntBASIC11.77□□□□□ -0.53
UBE2D3P61077 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
UBE2D3P61077 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC11.77□□□□□ -0.53
UBE2D3P61077 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC11.77□□□□□ -0.53
UBE2D3P61077 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC11.77□□□□□ -0.53
UBE2D3P61077 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC11.77□□□□□ -0.53
UBE2D3P61077 MIR4492-201ENST00000581627 80 ntBASIC11.77□□□□□ -0.53
UBE2D3P61077 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC11.77□□□□□ -0.53
UBE2D3P61077 REXO1L6P-202ENST00000619970 1078 ntBASIC11.77□□□□□ -0.53
UBE2D3P61077 REXO1L3P-201ENST00000622202 1288 ntBASIC11.77□□□□□ -0.53
UBE2D3P61077 AL805961.1-202ENST00000641562 540 ntBASIC11.77□□□□□ -0.53
UBE2D3P61077 ATG4B-205ENST00000404914 2878 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.53
UBE2D3P61077 HTR3E-201ENST00000335304 1912 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC11.77□□□□□ -0.53
UBE2D3P61077 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC11.77□□□□□ -0.53
UBE2D3P61077 HPCAL1-207ENST00000620771 1941 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
UBE2D3P61077 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC11.77□□□□□ -0.53
UBE2D3P61077 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 AIFM1-201ENST00000287295 2260 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 KIF5B-201ENST00000302418 5877 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 UCKL1-203ENST00000369908 1954 ntAPPRIS P1 TSL 2 BASIC11.77□□□□□ -0.53
UBE2D3P61077 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 ATP5S-201ENST00000245448 1671 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC11.77□□□□□ -0.53
UBE2D3P61077 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC11.77□□□□□ -0.53
UBE2D3P61077 CHAD-201ENST00000258969 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC11.77□□□□□ -0.53
UBE2D3P61077 TSPAN14-210ENST00000616406 2436 ntTSL 2 BASIC11.77□□□□□ -0.53
UBE2D3P61077 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC11.77□□□□□ -0.53
UBE2D3P61077 ZFYVE19-203ENST00000355341 2775 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
UBE2D3P61077 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC11.77□□□□□ -0.53
UBE2D3P61077 SNX33P1-201ENST00000592116 1762 ntBASIC11.77□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms