Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC15.98■□□□□ 0.15
PDX1P52945 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.98■□□□□ 0.15
PDX1P52945 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.98■□□□□ 0.15
PDX1P52945 GHDC-202ENST00000414034 2496 ntTSL 2 BASIC15.98■□□□□ 0.15
PDX1P52945 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC15.98■□□□□ 0.15
PDX1P52945 MAGI2-AS3-208ENST00000446159 670 ntTSL 3 BASIC15.98■□□□□ 0.15
PDX1P52945 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC15.98■□□□□ 0.15
PDX1P52945 AC092691.1-201ENST00000484092 554 ntTSL 4 BASIC15.98■□□□□ 0.15
PDX1P52945 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC15.98■□□□□ 0.15
PDX1P52945 STX3-203ENST00000529177 1571 ntTSL 2 BASIC15.98■□□□□ 0.15
PDX1P52945 AL133467.1-201ENST00000554161 993 ntTSL 2 BASIC15.98■□□□□ 0.15
PDX1P52945 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PDX1P52945 Z97055.2-201ENST00000563715 859 ntTSL 3 BASIC15.98■□□□□ 0.15
PDX1P52945 DEF8-225ENST00000569453 1852 ntAPPRIS P4 TSL 2 BASIC15.98■□□□□ 0.15
PDX1P52945 AC119396.1-201ENST00000576789 1558 ntAPPRIS P1 TSL 5 BASIC15.98■□□□□ 0.15
PDX1P52945 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC15.98■□□□□ 0.15
PDX1P52945 MIR4492-201ENST00000581627 80 ntBASIC15.98■□□□□ 0.15
PDX1P52945 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC15.98■□□□□ 0.15
PDX1P52945 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC15.98■□□□□ 0.15
PDX1P52945 AC005391.1-201ENST00000613285 341 ntTSL 3 BASIC15.98■□□□□ 0.15
PDX1P52945 AC073592.8-201ENST00000624126 511 ntBASIC15.98■□□□□ 0.15
PDX1P52945 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC15.98■□□□□ 0.15
PDX1P52945 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 CPEB2-201ENST00000259997 5612 ntAPPRIS ALT2 TSL 5 BASIC15.98■□□□□ 0.15
PDX1P52945 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 FOXO1B-201ENST00000504678 1527 ntBASIC15.98■□□□□ 0.15
PDX1P52945 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC15.98■□□□□ 0.15
PDX1P52945 TDRD6-203ENST00000544460 8887 ntAPPRIS ALT2 TSL 2 BASIC15.98■□□□□ 0.15
PDX1P52945 ANKMY1-202ENST00000361678 2499 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 ARPC5-201ENST00000294742 1637 ntAPPRIS ALT1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 CDIP1-207ENST00000564828 1636 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 STARD3NL-204ENST00000434197 1341 ntTSL 5 BASIC15.97■□□□□ 0.15
PDX1P52945 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 CD300A-202ENST00000360141 1858 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 THTPA-203ENST00000554789 1595 ntTSL 2 BASIC15.97■□□□□ 0.15
PDX1P52945 ALDH3A2-225ENST00000630662 1558 ntTSL 5 BASIC15.97■□□□□ 0.15
PDX1P52945 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PDX1P52945 ERCC1-201ENST00000013807 1278 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 WWOX-201ENST00000355860 710 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 SLC2A8-201ENST00000373352 914 ntTSL 2 BASIC15.97■□□□□ 0.15
PDX1P52945 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 PLA2G16-203ENST00000415826 1099 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PDX1P52945 PRKAG2-AS1-202ENST00000467458 1064 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 AC105233.2-201ENST00000523697 349 ntBASIC15.97■□□□□ 0.15
PDX1P52945 AF228730.5-201ENST00000530288 346 ntBASIC15.97■□□□□ 0.15
PDX1P52945 PTHLH-206ENST00000538310 854 ntTSL 5 BASIC15.97■□□□□ 0.15
PDX1P52945 AC124947.2-201ENST00000547118 1133 ntBASIC15.97■□□□□ 0.15
PDX1P52945 COX11-202ENST00000571584 1108 ntTSL 2 BASIC15.97■□□□□ 0.15
PDX1P52945 AC073389.1-201ENST00000595595 795 ntBASIC15.97■□□□□ 0.15
PDX1P52945 AC018529.1-201ENST00000613063 361 ntBASIC15.97■□□□□ 0.15
PDX1P52945 PLA2G16-206ENST00000639271 957 ntTSL 5 BASIC15.97■□□□□ 0.15
PDX1P52945 PLEKHG4-205ENST00000450733 4480 ntAPPRIS ALT2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 CACNA1A-221ENST00000636012 7500 ntAPPRIS ALT2 TSL 5 BASIC15.97■□□□□ 0.15
PDX1P52945 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 AZI2-205ENST00000420543 1366 ntTSL 3 BASIC15.97■□□□□ 0.15
PDX1P52945 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC15.97■□□□□ 0.15
PDX1P52945 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 AGGF1P2-201ENST00000426656 2106 ntBASIC15.97■□□□□ 0.15
PDX1P52945 PDLIM1-201ENST00000329399 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC15.97■□□□□ 0.15
PDX1P52945 ADAMTSL5-201ENST00000330475 2857 ntAPPRIS P1 TSL 2 BASIC15.97■□□□□ 0.15
PDX1P52945 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC15.97■□□□□ 0.15
PDX1P52945 TACR2-202ENST00000373307 1740 ntTSL 2 BASIC15.97■□□□□ 0.15
PDX1P52945 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 SERF2-203ENST00000381359 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 HOXA5-201ENST00000222726 1657 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC15.96■□□□□ 0.15
PDX1P52945 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 PDPK2P-201ENST00000382326 2387 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC15.96■□□□□ 0.15
PDX1P52945 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC15.96■□□□□ 0.15
PDX1P52945 CDK2AP2P3-201ENST00000422476 372 ntBASIC15.96■□□□□ 0.15
PDX1P52945 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC15.96■□□□□ 0.15
PDX1P52945 C8orf46-205ENST00000480005 865 ntTSL 2 BASIC15.96■□□□□ 0.15
PDX1P52945 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC15.96■□□□□ 0.15
PDX1P52945 CHMP4A-204ENST00000530996 967 ntTSL 3 BASIC15.96■□□□□ 0.15
PDX1P52945 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC15.96■□□□□ 0.15
PDX1P52945 AP000894.3-201ENST00000582554 351 ntTSL 5 BASIC15.96■□□□□ 0.15
Retrieved 100 of 98,524 protein–RNA pairs in 29.3 ms