Protein–RNA interactions for Protein: P37088

SCNN1A, Amiloride-sensitive sodium channel subunit alpha, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1AP37088 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
SCNN1AP37088 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCNN1AP37088 SLFNL1-201ENST00000302946 1951 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
SCNN1AP37088 TNKS-211ENST00000520408 1964 ntTSL 2 BASIC17.08■□□□□ 0.32
SCNN1AP37088 SERAC1-201ENST00000367101 1907 ntTSL 5 BASIC17.08■□□□□ 0.32
SCNN1AP37088 AL662844.4-201ENST00000606367 2838 ntBASIC17.07■□□□□ 0.32
SCNN1AP37088 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 FBLIM1-201ENST00000332305 1530 ntTSL 2 BASIC17.07■□□□□ 0.32
SCNN1AP37088 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 AL391005.1-201ENST00000623953 2435 ntBASIC17.07■□□□□ 0.32
SCNN1AP37088 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC17.07■□□□□ 0.32
SCNN1AP37088 AJ239322.1-201ENST00000419362 2209 ntTSL 2 BASIC17.07■□□□□ 0.32
SCNN1AP37088 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.07■□□□□ 0.32
SCNN1AP37088 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 AL627223.1-201ENST00000416693 442 ntBASIC17.07■□□□□ 0.32
SCNN1AP37088 AL137003.1-201ENST00000423260 491 ntTSL 5 BASIC17.07■□□□□ 0.32
SCNN1AP37088 PKD2-202ENST00000502363 1222 ntTSL 5 BASIC17.07■□□□□ 0.32
SCNN1AP37088 SMIM15-AS1-201ENST00000506902 796 ntTSL 3 BASIC17.07■□□□□ 0.32
SCNN1AP37088 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC17.07■□□□□ 0.32
SCNN1AP37088 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC17.07■□□□□ 0.32
SCNN1AP37088 AC004835.2-201ENST00000603762 682 ntBASIC17.07■□□□□ 0.32
SCNN1AP37088 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC17.07■□□□□ 0.32
SCNN1AP37088 LINC00466-208ENST00000635218 1217 ntTSL 5 BASIC17.07■□□□□ 0.32
SCNN1AP37088 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
SCNN1AP37088 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 SBSN-201ENST00000452271 1945 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 LTBP4-205ENST00000396819 4764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 SEPT8-205ENST00000378701 1817 ntTSL 2 BASIC17.07■□□□□ 0.32
SCNN1AP37088 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.07■□□□□ 0.32
SCNN1AP37088 KCNJ5-201ENST00000338350 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC17.07■□□□□ 0.32
SCNN1AP37088 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
SCNN1AP37088 LIPE-AS1-201ENST00000457234 1501 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 TBL2-201ENST00000305632 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 CD300LG-204ENST00000539718 1399 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 SAE1-202ENST00000392776 1851 ntTSL 3 BASIC17.06■□□□□ 0.32
SCNN1AP37088 FAM92B-201ENST00000539556 1898 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SCNN1AP37088 BEX4-202ENST00000372695 1328 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 WDR20-211ENST00000556807 2382 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC17.06■□□□□ 0.32
SCNN1AP37088 C11orf88-201ENST00000332814 795 ntAPPRIS P4 TSL 5 BASIC17.06■□□□□ 0.32
SCNN1AP37088 CGB3-201ENST00000357383 877 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 CGB2-201ENST00000359342 627 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SCNN1AP37088 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC17.06■□□□□ 0.32
SCNN1AP37088 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC17.06■□□□□ 0.32
SCNN1AP37088 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC17.06■□□□□ 0.32
SCNN1AP37088 SLC25A39P2-201ENST00000537614 270 ntBASIC17.06■□□□□ 0.32
SCNN1AP37088 LHX5-AS1-201ENST00000551357 522 ntTSL 2 BASIC17.06■□□□□ 0.32
SCNN1AP37088 TNNT1-211ENST00000588426 683 ntTSL 5 BASIC17.06■□□□□ 0.32
SCNN1AP37088 TVP23A-210ENST00000612195 1298 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 TRMT44-201ENST00000389737 2799 ntAPPRIS P2 TSL 5 BASIC17.06■□□□□ 0.32
SCNN1AP37088 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 CANT1-211ENST00000591773 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 DOC2GP-204ENST00000639052 2548 ntBASIC17.06■□□□□ 0.32
SCNN1AP37088 MFSD11-207ENST00000586622 2952 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
SCNN1AP37088 PARVB-203ENST00000404989 1591 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 PARVB-204ENST00000406477 1569 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 MEAF6-201ENST00000296214 1525 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 LOH12CR2-201ENST00000381800 1540 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
SCNN1AP37088 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC17.06■□□□□ 0.32
SCNN1AP37088 FAM57B-202ENST00000380495 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 C2orf48-201ENST00000381786 1897 ntTSL 2 BASIC17.05■□□□□ 0.32
SCNN1AP37088 FRMD6-AS1-201ENST00000617151 2229 ntBASIC17.05■□□□□ 0.32
SCNN1AP37088 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 KLHL31-201ENST00000370905 5743 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 PDCD1-201ENST00000334409 2114 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 OCLN-202ENST00000396442 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 RGS20-201ENST00000276500 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 AC005253.1-201ENST00000597411 2001 ntTSL 4 BASIC17.05■□□□□ 0.32
SCNN1AP37088 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 CCDC12-201ENST00000292314 1017 ntTSL 5 BASIC17.05■□□□□ 0.32
SCNN1AP37088 CCNL1-201ENST00000295925 549 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 TMEM270-201ENST00000320531 854 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC17.05■□□□□ 0.32
SCNN1AP37088 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 TMEM176A-202ENST00000461345 635 ntAPPRIS ALT2 TSL 5 BASIC17.05■□□□□ 0.32
SCNN1AP37088 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC17.05■□□□□ 0.32
SCNN1AP37088 KIAA0930-215ENST00000496226 589 ntTSL 5 BASIC17.05■□□□□ 0.32
SCNN1AP37088 AC093520.2-201ENST00000561830 333 ntBASIC17.05■□□□□ 0.32
SCNN1AP37088 LYRM1-209ENST00000568663 857 ntAPPRIS P1 TSL 4 BASIC17.05■□□□□ 0.32
SCNN1AP37088 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
SCNN1AP37088 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC17.05■□□□□ 0.32
SCNN1AP37088 PPHLN1-204ENST00000358314 1643 ntTSL 2 BASIC17.05■□□□□ 0.32
SCNN1AP37088 C1QTNF1-208ENST00000580474 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 47.5 ms